Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_E15
         (916 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011793-1|AAH11793.1|  736|Homo sapiens zinc finger CCCH-type c...   107   7e-23
AY578061-1|AAS90300.1|  579|Homo sapiens putative NY-REN-37 anti...   107   7e-23
AY578060-1|AAS90299.1|  736|Homo sapiens putative NY-REN-37 anti...   107   7e-23
AY578062-1|AAS90301.1|  571|Homo sapiens putative NY-REN-37 anti...    58   4e-08
AL834215-1|CAD38897.1|  571|Homo sapiens hypothetical protein pr...    58   4e-08
AY942025-1|AAY33373.1|  108|Homo sapiens anti-rabies virus immun...    31   5.8  

>BC011793-1|AAH11793.1|  736|Homo sapiens zinc finger CCCH-type
           containing 14 protein.
          Length = 736

 Score =  107 bits (256), Expect = 7e-23
 Identities = 51/83 (61%), Positives = 66/83 (79%)
 Frame = +1

Query: 211 VGSEIGQKMRSAIKAKLTELGCYVDDELPDYVMVMVANKRTRGQMEEDLQLFLGDNTELF 390
           +G+EI +K+RSAIK KL ELG YVD+ELPDY+MVMVANK+++ QM EDL LFLG+NT  F
Sbjct: 3   IGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTIRF 62

Query: 391 VNWLHQVLKKLQQVSVTAPITVE 459
             WLH VL KL+ V+ T P +++
Sbjct: 63  TVWLHGVLDKLRSVT-TEPSSLK 84


>AY578061-1|AAS90300.1|  579|Homo sapiens putative NY-REN-37 antigen
           isoform 2 protein.
          Length = 579

 Score =  107 bits (256), Expect = 7e-23
 Identities = 51/83 (61%), Positives = 66/83 (79%)
 Frame = +1

Query: 211 VGSEIGQKMRSAIKAKLTELGCYVDDELPDYVMVMVANKRTRGQMEEDLQLFLGDNTELF 390
           +G+EI +K+RSAIK KL ELG YVD+ELPDY+MVMVANK+++ QM EDL LFLG+NT  F
Sbjct: 3   IGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTIRF 62

Query: 391 VNWLHQVLKKLQQVSVTAPITVE 459
             WLH VL KL+ V+ T P +++
Sbjct: 63  TVWLHGVLDKLRSVT-TEPSSLK 84


>AY578060-1|AAS90299.1|  736|Homo sapiens putative NY-REN-37 antigen
           isoform 1 protein.
          Length = 736

 Score =  107 bits (256), Expect = 7e-23
 Identities = 51/83 (61%), Positives = 66/83 (79%)
 Frame = +1

Query: 211 VGSEIGQKMRSAIKAKLTELGCYVDDELPDYVMVMVANKRTRGQMEEDLQLFLGDNTELF 390
           +G+EI +K+RSAIK KL ELG YVD+ELPDY+MVMVANK+++ QM EDL LFLG+NT  F
Sbjct: 3   IGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTIRF 62

Query: 391 VNWLHQVLKKLQQVSVTAPITVE 459
             WLH VL KL+ V+ T P +++
Sbjct: 63  TVWLHGVLDKLRSVT-TEPSSLK 84


>AY578062-1|AAS90301.1|  571|Homo sapiens putative NY-REN-37 antigen
           isoform 3 protein.
          Length = 571

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +1

Query: 307 MVMVANKRTRGQMEEDLQLFLGDNTELFVNWLHQVLKKLQQVSVTAPITVE 459
           MVMVANK+++ QM EDL LFLG+NT  F  WLH VL KL+ V+ T P +++
Sbjct: 1   MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVT-TEPSSLK 50


>AL834215-1|CAD38897.1|  571|Homo sapiens hypothetical protein
           protein.
          Length = 571

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +1

Query: 307 MVMVANKRTRGQMEEDLQLFLGDNTELFVNWLHQVLKKLQQVSVTAPITVE 459
           MVMVANK+++ QM EDL LFLG+NT  F  WLH VL KL+ V+ T P +++
Sbjct: 1   MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVT-TEPSSLK 50


>AY942025-1|AAY33373.1|  108|Homo sapiens anti-rabies virus
           immunoglobulin light chain variable region protein.
          Length = 108

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +1

Query: 643 RPNIPPLLMNMEKNSEPS-ITDVFAG 717
           +P  PPLL+N +KN+ PS I D F+G
Sbjct: 38  KPGQPPLLVNYDKNNRPSGIPDRFSG 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,908,225
Number of Sequences: 237096
Number of extensions: 1899650
Number of successful extensions: 4008
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4008
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)