Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_E10
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D21852-1|BAA04878.2|  974|Homo sapiens KIAA0029 protein.               30   10.0 
BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1...    30   10.0 
AC011893-1|AAX88922.1|  314|Homo sapiens unknown protein.              30   10.0 

>D21852-1|BAA04878.2|  974|Homo sapiens KIAA0029 protein.
          Length = 974

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 855 PXPGGGGSLXQKNPPTXPPDLKHKXXQWWW*LVYC 751
           P PGGG  + Q + P  P    H   QW     YC
Sbjct: 699 PPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYC 733


>BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1
           protein.
          Length = 1099

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 855 PXPGGGGSLXQKNPPTXPPDLKHKXXQWWW*LVYC 751
           P PGGG  + Q + P  P    H   QW     YC
Sbjct: 824 PPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYC 858


>AC011893-1|AAX88922.1|  314|Homo sapiens unknown protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 855 PXPGGGGSLXQKNPPTXPPDLKHKXXQWWW*LVYC 751
           P PGGG  + Q + P  P    H   QW     YC
Sbjct: 39  PPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYC 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,575,832
Number of Sequences: 237096
Number of extensions: 2108080
Number of successful extensions: 6334
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6331
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)