Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_E07
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p pro...    34   0.30 
AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D ...    34   0.30 
AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA ...    34   0.30 

>AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p
           protein.
          Length = 392

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 24/55 (43%), Positives = 27/55 (49%)
 Frame = +1

Query: 295 FMKVGTELELLXIKIRCDWALXPXPLSNYXDAPVLRSDPXLDPRXNSFKXVFXTG 459
           F  VGTEL+ L  +IR      P PLSNY DA          P  N F+ VF TG
Sbjct: 42  FADVGTELQQL--RIRYGGGDVPEPLSNYMDAQYYGPIAIGSPPQN-FRVVFDTG 93


>AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D
           precursor protein.
          Length = 392

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 24/55 (43%), Positives = 27/55 (49%)
 Frame = +1

Query: 295 FMKVGTELELLXIKIRCDWALXPXPLSNYXDAPVLRSDPXLDPRXNSFKXVFXTG 459
           F  VGTEL+ L  +IR      P PLSNY DA          P  N F+ VF TG
Sbjct: 42  FADVGTELQQL--RIRYGGGDVPEPLSNYMDAQYYGPIAIGSPPQN-FRVVFDTG 93


>AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA
           protein.
          Length = 392

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 24/55 (43%), Positives = 27/55 (49%)
 Frame = +1

Query: 295 FMKVGTELELLXIKIRCDWALXPXPLSNYXDAPVLRSDPXLDPRXNSFKXVFXTG 459
           F  VGTEL+ L  +IR      P PLSNY DA          P  N F+ VF TG
Sbjct: 42  FADVGTELQQL--RIRYGGGDVPEPLSNYMDAQYYGPIAIGSPPQN-FRVVFDTG 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,071,837
Number of Sequences: 53049
Number of extensions: 366255
Number of successful extensions: 481
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)