Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_D24
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging ... 246 1e-65
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 34 0.13
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 34 0.17
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 32 0.67
Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical pr... 29 4.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 6.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 6.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 6.3
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 29 6.3
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 29 6.3
U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 28 8.3
>U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging
adult overexpressionprotein 3 protein.
Length = 303
Score = 246 bits (603), Expect = 1e-65
Identities = 128/259 (49%), Positives = 170/259 (65%), Gaps = 4/259 (1%)
Frame = +3
Query: 117 GIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAE 296
G+E + + +D+ Q++ + R F LAIVQVG R DSNVYI KLK A++IG +
Sbjct: 8 GLEYSKKVLHDVGQKIAKTREHHPNFHAVLAIVQVGNRSDSNVYINSKLKKAKEIGADGK 67
Query: 297 HIRLPRDITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLN 476
I+LP IT+ +L +I +LN + GII+Q+PLD H IDA V D + P KDVDGL
Sbjct: 68 LIKLPDTITQGDLKREIMALNHDNEIDGIIIQLPLDCKHEIDADSVIDLIDPLKDVDGLT 127
Query: 477 TINEGRVAVGDLSGFI-PCTPAGCVELIKK-TGVT--IAGKNVVVLGRSRIVGTPVSELL 644
IN GR+A G+L I PCTP GC+ L+++ TG ++GK VVVLGRS+IVG+P + L
Sbjct: 128 RINAGRLARGELQRTIFPCTPFGCLYLVQQATGDANFVSGKEVVVLGRSKIVGSPAAALF 187
Query: 645 KWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEXVRGSWIKPGAVVIDCGINAIEDPT 824
W H TVT+CHSKT NL E A+IL+VAIGR V+ WIKPGA VIDCGIN +DP
Sbjct: 188 LWHHGTVTICHSKTPNLKEKCLRADILIVAIGRKHFVKADWIKPGAFVIDCGINVGDDP- 246
Query: 825 KKSGQRLXGDVAYQXAVKV 881
+ +++ GDV + A +V
Sbjct: 247 --NSRKIYGDVDTEAAKEV 263
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 34.3 bits (75), Expect = 0.13
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Frame = -3
Query: 823 VGSSIALIPQSITTAPGLIQEPRTISGRPIATTSISAVLVISLKFLVFEWHTV-TVACSH 647
V +++ IP ++ T+P I P T+ P ++ + V +V TV TV +
Sbjct: 292 VPTTVVTIPSTVVTSP--ITTPSTVVTVPSTVVTVPSTAVTKPSTVVTAPSTVVTVPSTV 349
Query: 646 FSNSDTGV---PTMRLRPSTTTFLPAIVTPVFLMSSTHPAGVQGINPDRSPTATRPSLIV 476
+ +T V PT+ P+T P+ V V T P V T PS +V
Sbjct: 350 VTKPNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTV----------VTNPSTVV 399
Query: 475 FKPSTSLSGETASVTR*ASIAWSESRG 395
PST ++ T +T +++ + + G
Sbjct: 400 TAPSTVVTVPTTVMTSRSTVITTPTTG 426
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 790 ITTAPGLIQEPRTISGRPIATTSISA--VLVISLKFLVFEWHTVTVACSHFSNSDTGVPT 617
+TT+ S P T +IS V+++ T TV + + TG T
Sbjct: 231 VTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVP--TTTVTGPTT 288
Query: 616 MRLRPSTTTFLPA-IVTPVFLMSSTHPAGVQGINPDRSPTATRPSLIVFKPSTSLSGETA 440
+ P+T +P+ +VT ST + S T+PS +V PST ++ +
Sbjct: 289 VVTVPTTVVTIPSTVVTSPITTPSTVVTVPSTVVTVPSTAVTKPSTVVTAPSTVVTVPST 348
Query: 439 SVTR 428
VT+
Sbjct: 349 VVTK 352
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 1/124 (0%)
Frame = -3
Query: 799 PQSITTAPGLIQEPRTISGRPIATTSISAVLVISLKFLVFEWHTVTVACSHFSNSDTGVP 620
P + TT P T + TT+ + ++ T T + + T P
Sbjct: 182 PTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP 241
Query: 619 TMRLRPSTTTFLPAIVTPVFLMSSTHPAGVQGINPDRSP-TATRPSLIVFKPSTSLSGET 443
T P+TTT TP +T P +P T T P+ T+ S T
Sbjct: 242 TTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTT 301
Query: 442 ASVT 431
+ T
Sbjct: 302 TTKT 305
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.67
Identities = 35/116 (30%), Positives = 47/116 (40%)
Frame = -3
Query: 817 SSIALIPQSITTAPGLIQEPRTISGRPIATTSISAVLVISLKFLVFEWHTVTVACSHFSN 638
SS + S TT +G P+ T A + S+ L T VA S SN
Sbjct: 698 SSSGTVSNSTTTTTTATTTSSKSTGNPLFTCEHCARQLCSMSNLKRHRATCKVAASSSSN 757
Query: 637 SDTGVPTMRLRPSTTTFLPAIVTPVFLMSSTHPAGVQGINPDRSPTATRPSLIVFK 470
S P +PST PA TP+ L +S P +Q P +SP T ++ K
Sbjct: 758 SAASRPPS--QPSTPATAPA--TPM-LQASQAPQPLQA--PPQSPMETTATVTYTK 806
>Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical
protein C17G1.1 protein.
Length = 280
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 640 C*NGNTLLSQCAIQRLRI*VKLLRQQKYWWWRSVVQRXSEAL-GSSLEPSL*TVVSTLL 813
C G+ ++ +CA + I K + ++ W+W SV+ SEAL SS + SL LL
Sbjct: 76 CWTGDVVIKECASACVSIYTKS-KTREGWFWTSVLMDCSEALIWSSPDLSLKPTTMVLL 133
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = -3
Query: 784 TAPGLIQEPRTISGRPIATTSISAVLV--ISLKFLVFEWHTVTVACSHFSNSDTGVPTMR 611
TAP + P T P ++T+ V S T + +++ T T
Sbjct: 641 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 700
Query: 610 LRPSTTTFLPAIVTPVFLMSS----THPAGVQGINPDRSPTATRPSLIVFKPSTSLS 452
TT P + TP + + T PA P +PT T P+ F + S++
Sbjct: 701 TTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTTTQFSSAVSVA 757
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein
C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = -3
Query: 784 TAPGLIQEPRTISGRPIATTSISAVLV--ISLKFLVFEWHTVTVACSHFSNSDTGVPTMR 611
TAP + P T P ++T+ V S T + +++ T T
Sbjct: 697 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 756
Query: 610 LRPSTTTFLPAIVTPVFLMSS----THPAGVQGINPDRSPTATRPSLIVFKPSTSLS 452
TT P + TP + + T PA P +PT T P+ F + S++
Sbjct: 757 TTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTTTQFSSAVSVA 813
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = -3
Query: 784 TAPGLIQEPRTISGRPIATTSISAVLV--ISLKFLVFEWHTVTVACSHFSNSDTGVPTMR 611
TAP + P T P ++T+ V S T + +++ T T
Sbjct: 520 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
Query: 610 LRPSTTTFLPAIVTPVFLMSS----THPAGVQGINPDRSPTATRPSLIVFKPSTSLS 452
TT P + TP + + T PA P +PT T P+ F + S++
Sbjct: 580 TTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTTTQFSSAVSVA 636
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 679 EWHTVTVACSHFSNSDTGVPTMRLRPSTTTFL 584
+WH H SN+ VP + PST+T+L
Sbjct: 698 DWHVKQNLARHGSNNSAAVPYRQWYPSTSTWL 729
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 309 PRDITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNT 479
PRD+TE+E I+ L E ++ G+ V++ D D +D D D++ D NT
Sbjct: 581 PRDLTELEEELGISILEE--TLDGMNVELLDDDDWIVDDDNDEDGECIDEEEDYDNT 635
>U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical
protein D2096.5 protein.
Length = 137
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 112 YNLCHLSPEDCLVGRSNPDSNNLNLKEFPIVNG 14
Y + +L +C + + +N+K FP++NG
Sbjct: 92 YEIYYLIEHNCTPAGNKKKESKINVKSFPVING 124
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 503 YCYSTFVNCV*AVNIFIRRDSISDSMSVDRVV-RIKGHL-NNDAVNRRRFIQTRYF 342
Y +T+ + +V IF+ ++ S V+ R K HL +ND RRR ++ R+F
Sbjct: 169 YIITTYTDYYTSVAIFVVMSTLDFSTFTMLVLYRRKSHLTSNDETRRRRRVEIRFF 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,108,487
Number of Sequences: 27780
Number of extensions: 418620
Number of successful extensions: 1186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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