Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D22
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0123 + 4537231-4537366,4538088-4538171,4538432-4538586,453...    32   0.55 
10_08_0841 - 20948719-20948919,20949624-20950388,20950475-209510...    29   6.7  
12_02_0534 - 20103908-20105897,20106314-20107116                       28   8.9  
01_06_0718 - 31467530-31467892,31468017-31468178,31468268-314684...    28   8.9  

>09_02_0123 +
           4537231-4537366,4538088-4538171,4538432-4538586,
           4539115-4539294,4539814-4540169,4540797-4540953
          Length = 355

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 523 NTRENSHSTQIEGEPELGCLEYVSTYNFSNLDVGFMKNKSLVH 651
           ++++NSH  ++EG  E  CL Y    ++ +L V F   + + H
Sbjct: 74  SSQKNSHLQKLEGAKERLCLNYADVMDYDSLSVAFNGCEGVFH 116


>10_08_0841 -
           20948719-20948919,20949624-20950388,20950475-20951023,
           20951097-20951237,20951313-20951519,20951556-20951724,
           20951899-20952003,20952087-20952208,20952291-20952412,
           20953234-20953516
          Length = 887

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +1

Query: 316 GTYYLEDLPDFWFTSKTEQVGDIFLLHIFIQRYCEGSFSISISHGSETEIDKKQKIVRLT 495
           GT+   D P+F  T +     DI+   I I R   G  ++ I+   E  +DK +  + + 
Sbjct: 688 GTFAYMD-PEFLTTGELTARSDIYSFGIIILRLVTGKPALGIAREVEVALDKGELELLVD 746

Query: 496 KSLKEYKF 519
           +S  ++ F
Sbjct: 747 RSAGDWPF 754


>12_02_0534 - 20103908-20105897,20106314-20107116
          Length = 930

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 611 LEKLYVLTYSKQPSSGSPSICVE*LFSLVFSNLYSFSD 498
           LE+LY+  +++    G   + +E L+SL  + +YSF D
Sbjct: 866 LERLYLSIWTRLRRGGLNDLGLENLYSLRHATIYSFDD 903


>01_06_0718 -
           31467530-31467892,31468017-31468178,31468268-31468415,
           31468536-31468612,31468693-31468763,31468965-31469051,
           31469138-31469602,31470357-31470659,31471151-31471202
          Length = 575

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = +1

Query: 340 PDFWFTSKTEQVGDIFLLHIFIQRYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKF 519
           P++  T K     D+F   + +     G   I +SHG + +         L ++++E  F
Sbjct: 356 PEYAATGKVNDRSDVFSFGVMLLELITGKKPIMVSHGDQPDTLVSWARPLLVRAVEEENF 415

Query: 520 E 522
           E
Sbjct: 416 E 416


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,773,585
Number of Sequences: 37544
Number of extensions: 464954
Number of successful extensions: 957
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)