Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D21
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    81   1e-15
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     81   2e-15
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    81   2e-15
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080...    28   8.6  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 34/49 (69%), Positives = 36/49 (73%)
 Frame = +3

Query: 81  WYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 227
           W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K+
Sbjct: 7   WNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 34/48 (70%), Positives = 35/48 (72%)
 Frame = +3

Query: 81  WYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 224
           W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 7   WNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 34/48 (70%), Positives = 35/48 (72%)
 Frame = +3

Query: 81  WYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 224
           W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 7   WNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>11_04_0158 +
           14207463-14207629,14207724-14207774,14207874-14208002,
           14209342-14209447,14209491-14209601,14210042-14210098,
           14210903-14211727
          Length = 481

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +3

Query: 63  WATQIFWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDI 212
           W   +FW   PR   +G   C+   +   L+  +    CR    E   DI
Sbjct: 44  WTYSVFWTIRPRPRCRGGNGCKVGDDNGSLMLMWEDGFCRPRVAECLEDI 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,844,569
Number of Sequences: 37544
Number of extensions: 169745
Number of successful extensions: 243
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)