SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D20
         (939 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M21154-1|AAA51716.1|  334|Homo sapiens AMD2 protein.                  122   1e-27
BC000171-1|AAH00171.1|  334|Homo sapiens adenosylmethionine deca...   122   1e-27
AL365206-1|CAI23233.1|  334|Homo sapiens adenosylmethionine deca...   122   1e-27
AL357515-1|CAH73388.1|  334|Homo sapiens adenosylmethionine deca...   122   1e-27
AL365206-2|CAI23234.1|  265|Homo sapiens adenosylmethionine deca...    60   2e-08
AL357515-2|CAH73389.1|  265|Homo sapiens adenosylmethionine deca...    60   2e-08
BC131733-1|AAI31734.1| 1509|Homo sapiens ADAMTS12 protein protein.     34   0.65 
AJ250725-1|CAC20419.1| 1593|Homo sapiens a disintegrin-like and ...    34   0.65 

>M21154-1|AAA51716.1|  334|Homo sapiens AMD2 protein.
          Length = 334

 Score =  122 bits (295), Expect = 1e-27
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
 Frame = +1

Query: 322 FFEGVEKLIEIWFT---PAKN---ADLRKITRQQWENVLKIVRCEIISFTQSEQVDAYVL 483
           FFEG EKL+E+WF+   P  N    DLR I R +W+ +LK V+C IIS T++++ +AYVL
Sbjct: 6   FFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVL 65

Query: 484 SESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARP 648
           SESSMFVS+RR+ILKTCGTT  L+ +  +L LA+D +G   + + FYSR+ F +P
Sbjct: 66  SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 120


>BC000171-1|AAH00171.1|  334|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 334

 Score =  122 bits (295), Expect = 1e-27
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
 Frame = +1

Query: 322 FFEGVEKLIEIWFT---PAKN---ADLRKITRQQWENVLKIVRCEIISFTQSEQVDAYVL 483
           FFEG EKL+E+WF+   P  N    DLR I R +W+ +LK V+C IIS T++++ +AYVL
Sbjct: 6   FFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVL 65

Query: 484 SESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARP 648
           SESSMFVS+RR+ILKTCGTT  L+ +  +L LA+D +G   + + FYSR+ F +P
Sbjct: 66  SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 120


>AL365206-1|CAI23233.1|  334|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 334

 Score =  122 bits (295), Expect = 1e-27
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
 Frame = +1

Query: 322 FFEGVEKLIEIWFT---PAKN---ADLRKITRQQWENVLKIVRCEIISFTQSEQVDAYVL 483
           FFEG EKL+E+WF+   P  N    DLR I R +W+ +LK V+C IIS T++++ +AYVL
Sbjct: 6   FFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVL 65

Query: 484 SESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARP 648
           SESSMFVS+RR+ILKTCGTT  L+ +  +L LA+D +G   + + FYSR+ F +P
Sbjct: 66  SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 120


>AL357515-1|CAH73388.1|  334|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 334

 Score =  122 bits (295), Expect = 1e-27
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
 Frame = +1

Query: 322 FFEGVEKLIEIWFT---PAKN---ADLRKITRQQWENVLKIVRCEIISFTQSEQVDAYVL 483
           FFEG EKL+E+WF+   P  N    DLR I R +W+ +LK V+C IIS T++++ +AYVL
Sbjct: 6   FFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVL 65

Query: 484 SESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARP 648
           SESSMFVS+RR+ILKTCGTT  L+ +  +L LA+D +G   + + FYSR+ F +P
Sbjct: 66  SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 120


>AL365206-2|CAI23234.1|  265|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 265

 Score = 59.7 bits (138), Expect = 2e-08
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = +1

Query: 496 MFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARP 648
           MFVS+RR+ILKTCGTT  L+ +  +L LA+D +G   + + FYSR+ F +P
Sbjct: 1   MFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 51


>AL357515-2|CAH73389.1|  265|Homo sapiens adenosylmethionine
           decarboxylase 1 protein.
          Length = 265

 Score = 59.7 bits (138), Expect = 2e-08
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = +1

Query: 496 MFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARP 648
           MFVS+RR+ILKTCGTT  L+ +  +L LA+D +G   + + FYSR+ F +P
Sbjct: 1   MFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 51


>BC131733-1|AAI31734.1| 1509|Homo sapiens ADAMTS12 protein protein.
          Length = 1509

 Score = 34.3 bits (75), Expect = 0.65
 Identities = 21/94 (22%), Positives = 46/94 (48%)
 Frame = +1

Query: 364 PAKNADLRKITRQQWENVLKIVRCEIISFTQSEQVDAYVLSESSMFVSRRRWILKTCGTT 543
           P+++   R I++++W   L +   ++I +  SE V++Y+L+  +M      +   + G  
Sbjct: 233 PSRSLSRRSISKERWVETLVVADTKMIEYHGSENVESYILTIMNMVTG--LFHNPSIGNA 290

Query: 544 TPLRCVRAVLALAQDVAGHSCVHNVFYSRREFAR 645
             +  VR +L L ++  G   VH+   +   F +
Sbjct: 291 IHIVVVRLIL-LEEEEQGLKIVHHAEKTLSSFCK 323


>AJ250725-1|CAC20419.1| 1593|Homo sapiens a disintegrin-like and
           metalloprotease (reprolysin type) with thrombospondin ty
           protein.
          Length = 1593

 Score = 34.3 bits (75), Expect = 0.65
 Identities = 21/94 (22%), Positives = 46/94 (48%)
 Frame = +1

Query: 364 PAKNADLRKITRQQWENVLKIVRCEIISFTQSEQVDAYVLSESSMFVSRRRWILKTCGTT 543
           P+++   R I++++W   L +   ++I +  SE V++Y+L+  +M      +   + G  
Sbjct: 233 PSRSLSRRSISKERWVETLVVADTKMIEYHGSENVESYILTIMNMVTG--LFHNPSIGNA 290

Query: 544 TPLRCVRAVLALAQDVAGHSCVHNVFYSRREFAR 645
             +  VR +L L ++  G   VH+   +   F +
Sbjct: 291 IHIVVVRLIL-LEEEEQGLKIVHHAEKTLSSFCK 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,516,121
Number of Sequences: 237096
Number of extensions: 2567152
Number of successful extensions: 8367
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8363
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -