Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D19
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0274 - 2027449-2027646,2027729-2027873,2028267-2028379,202...    30   2.9  
03_01_0581 + 4310136-4310186,4310940-4311144,4311245-4311410,431...    28   8.9  

>06_01_0274 -
           2027449-2027646,2027729-2027873,2028267-2028379,
           2028466-2028484,2028876-2029189
          Length = 262

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = +2

Query: 488 FYSSEPNNLREELTRYQFFLQL-----KKDLLESRLQCP-NTTAVELAALSLQSELGDYD 649
           FY +EP + + EL R  F LQL     +++LL S L    N  A EL + + Q+ +    
Sbjct: 189 FYPAEPEHQKFELKRKPFLLQLIGNLPEEELLTSTLAAKLNAYAAELCSPNTQNRINSKI 248

Query: 650 DTV 658
           D +
Sbjct: 249 DEI 251


>03_01_0581 +
           4310136-4310186,4310940-4311144,4311245-4311410,
           4312035-4312257,4312891-4312967,4313091-4313278,
           4313363-4313457,4313674-4313807,4313914-4314024,
           4314304-4314619,4314919-4315040,4315183-4315293,
           4315824-4316012,4316105-4316263,4316449-4316530,
           4317080-4317190
          Length = 779

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = -2

Query: 544 KELISSQLFPKIIRLRRIKFNSKSECIRRANLYLFLYGFSRIKPMFHIICISE 386
           + L +++L P +++   ++ N   +C+ R N+  F YG + +    H++ ++E
Sbjct: 434 QNLCATKLVPLLLQKGVLRTNC-IDCLDRTNVAQFAYGLAALGRQLHVLQLNE 485


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,967,402
Number of Sequences: 37544
Number of extensions: 234002
Number of successful extensions: 416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)