Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_D15
(922 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 36 0.045
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.045
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 32 0.56
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.7
03_01_0515 - 3864796-3865425 30 2.3
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 29 3.9
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 29 3.9
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 5.2
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 29 6.9
07_03_1136 + 24218601-24218734,24218769-24219906 29 6.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 6.9
01_01_1143 - 9064210-9065682 29 6.9
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 28 9.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.1
01_03_0005 + 11568545-11569119,11569179-11569191 28 9.1
>07_01_0479 + 3606663-3607448
Length = 261
Score = 35.9 bits (79), Expect = 0.045
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXG-XXGVFXXGPPPP 679
PPPG PP G P+ PG P GP P G F G PPP
Sbjct: 203 PPPGPFMRGPPPMGPPQ---VRPGMPGGPPPGMRPGMPPPPFRPGMPPP 248
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +2
Query: 536 PPPGGXXXX--PPXXGXP--REXFFXPGXPXGPXPPKXXGXXGVFXXGPPP 676
PPPG PP P R P P GP PP G F GPPP
Sbjct: 169 PPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPP-----PGPFMRGPPP 214
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.9 bits (79), Expect = 0.045
Identities = 20/48 (41%), Positives = 20/48 (41%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP G PP G P P P GP PP G GPPPP
Sbjct: 339 PPPKGPPPPPPAKGPP-----PPPPPKGPSPPPPPPPGGK-KGGPPPP 380
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 407 PXPPPXXXKKKXXPXGGEXXXPXXKGXXKXXXXPQIXKKXXXXPPX*XGGXPXXP 243
P PPP P G P KG P KK PP GG P
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Frame = -2
Query: 411 PPXXPPXXGKKKXXPXGGGKXXXXXKRGXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXX 232
PP PP P K K P K PP G P P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPP--PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
Query: 231 X--GGGPXXPPQRGXXXPP 181
GG P PP+ G PP
Sbjct: 372 GKKGGPPPPPPKGGASRPP 390
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 675 GGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGG 535
GGG P G P PG N G GGK K GGG
Sbjct: 181 GGGAGAVAPPFAMTPHGKQPVAPPGNGNGGGGGGGGGGKKKGKKGGG 227
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
P G PP P GP PP G G GPPPP
Sbjct: 340 PSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPP 387
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP PP P P P P PP PPPP
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPP 109
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +2
Query: 536 PPPGGXXXX--PPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGP 670
PPPG PP P F P P PP G GV P
Sbjct: 62 PPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPPGVMPSQP 108
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGP--XGXPGXKNXSRGXPXXGGKXKXPPGGG 535
GGGGP P GG GP G G + G P G K G G
Sbjct: 12 GGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGSKPRRGNG 61
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGP--XGXPGXKNXSRGXPXXGGKXKXPPGGG 535
GGG P P GG GP G G + G P G K G G
Sbjct: 12 GGGNPRGGGGGGPRGCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDG 61
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP 520
GG G + P GG G G P + SRG GG GGG + P
Sbjct: 22 GGDGRFGRGPSRWSSGGGGGGSGSPPHR-FSRGGGGGGGDGGGGGGGGGRFHP 73
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPX----GXPGXKNXSRGXPXXGGKXKXPPGGG 535
GGGGP P G P G G G GG PPGGG
Sbjct: 113 GGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGG 164
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP P PR G P P P GV PPPP
Sbjct: 1174 PPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
>01_01_1143 - 9064210-9065682
Length = 490
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGG 538
G G P G G G PG G GG PPGG
Sbjct: 436 GANGSGLPNPGASAGLGSSGLPGMPGAGGYLGGYGGGGGYGSTPPGG 482
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = -2
Query: 396 PXXGKKKXXPXGGGKXXXXXKRGXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGP 217
P GKK GGG+ P Q+ P + GGG P GGGP
Sbjct: 323 PAQGKKGGGGGGGGQGGGVGG----PMGGMPAQQQAMMMRPNMMGGGAGFPGMGQMGGGP 378
Query: 216 XXPP 205
P
Sbjct: 379 MTMP 382
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP G P P P P P PP PPPP
Sbjct: 96 PPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPP 143
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGX-----KNXSRGXPXXGGKXKXPPGGGXKXXPPP 514
GGGG T P GG G G G GG + GGG PPP
Sbjct: 83 GGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPP 142
Query: 513 KN 508
N
Sbjct: 143 PN 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,371,121
Number of Sequences: 37544
Number of extensions: 311315
Number of successful extensions: 632
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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