Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_D15
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.018
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.018
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.018
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.12
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.12
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.16
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.22
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.22
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.22
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 33 0.38
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 1.5
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 30 2.0
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 30 2.0
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.7
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 2.7
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 2.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.7
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 2.7
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 2.7
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 2.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.7
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.7
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.7
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 29 6.2
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 6.2
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 6.2
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 6.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 6.2
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 8.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/55 (43%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 518 GGXXFXPPPGGXXXXPPXXGXPREXFFXPGX-PXGPXPPKXXGXXGVFXXGPPPP 679
GG PPPGG PP G P PG P P PP G F GPPPP
Sbjct: 740 GGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPP 787
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 545 GGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
GG PP G P P GP PP G GPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPX---GPXPPKXXGXXGVFXXGPPPP 679
PPPG PP G P G P GP PP G GPPPP
Sbjct: 715 PPPG----LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Frame = -2
Query: 411 PPXXPPXXGKKKXXPXGGG-KXXXXXKRGXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXX 235
PP PP G P GG P PP GG P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 234 XXG---GGPXXPPQRGXXXP 184
G GGP PP G P
Sbjct: 776 PPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 276 PXLXGGGPXXPXXXXXGGGPXXPPQRGXXXP 184
P + GG P P GGP PP G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/55 (43%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 518 GGXXFXPPPGGXXXXPPXXGXPREXFFXPGX-PXGPXPPKXXGXXGVFXXGPPPP 679
GG PPPGG PP G P PG P P PP G F GPPPP
Sbjct: 740 GGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPP 787
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 545 GGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
GG PP G P P GP PP G GPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPX---GPXPPKXXGXXGVFXXGPPPP 679
PPPG PP G P G P GP PP G GPPPP
Sbjct: 715 PPPG----LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Frame = -2
Query: 411 PPXXPPXXGKKKXXPXGGG-KXXXXXKRGXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXX 235
PP PP G P GG P PP GG P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 234 XXG---GGPXXPPQRGXXXP 184
G GGP PP G P
Sbjct: 776 PPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 276 PXLXGGGPXXPXXXXXGGGPXXPPQRGXXXP 184
P + GG P P GGP PP G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/55 (43%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 518 GGXXFXPPPGGXXXXPPXXGXPREXFFXPGX-PXGPXPPKXXGXXGVFXXGPPPP 679
GG PPPGG PP G P PG P P PP G F GPPPP
Sbjct: 323 GGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPP 370
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 545 GGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
GG PP G P P GP PP G GPPPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPX---GPXPPKXXGXXGVFXXGPPPP 679
PPPG PP G P G P GP PP G GPPPP
Sbjct: 298 PPPG----LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Frame = -2
Query: 411 PPXXPPXXGKKKXXPXGGG-KXXXXXKRGXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXX 235
PP PP G P GG P PP GG P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 234 XXG---GGPXXPPQRGXXXP 184
G GGP PP G P
Sbjct: 359 PPGGFKGGPPPPPPPGMFAP 378
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 276 PXLXGGGPXXPXXXXXGGGPXXPPQRGXXXP 184
P + GG P P GGP PP G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPX--GPXPPKXXGXXGVFXXGPPPP 679
PPP PP P PG P P PP G G+ PPPP
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPX--GPXPPKXXGXXGVFXXGPPPP 679
PPP PP P PG P P PP G G+ PPPP
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.16
Identities = 33/156 (21%), Positives = 34/156 (21%)
Frame = -2
Query: 675 GGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPKNRXXX 496
GG P P GG P S G P G PP GG P
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPS 208
Query: 495 XXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKRGXKKX 316
+ P PP P GG G
Sbjct: 209 GGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 268
Query: 315 XXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
P PP GP P GGP P
Sbjct: 269 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 304
Score = 33.9 bits (74), Expect = 0.16
Identities = 34/161 (21%), Positives = 35/161 (21%), Gaps = 6/161 (3%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKX------PPGGGXKXXPPPK 511
G P P P G P G P G P GG PP GG P
Sbjct: 219 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPS 278
Query: 510 NRXXXXXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKR 331
+ P PP P GG
Sbjct: 279 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPS 338
Query: 330 GXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
G P PP GP P GGP P
Sbjct: 339 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 379
Score = 33.9 bits (74), Expect = 0.16
Identities = 34/161 (21%), Positives = 35/161 (21%), Gaps = 6/161 (3%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKX------PPGGGXKXXPPPK 511
G P P P G P G P G P GG PP GG P
Sbjct: 324 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPS 383
Query: 510 NRXXXXXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKR 331
+ P PP P GG
Sbjct: 384 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPS 443
Query: 330 GXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
G P PP GP P GGP P
Sbjct: 444 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 484
Score = 33.9 bits (74), Expect = 0.16
Identities = 34/161 (21%), Positives = 35/161 (21%), Gaps = 6/161 (3%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKX------PPGGGXKXXPPPK 511
G P P P G P G P G P GG PP GG P
Sbjct: 339 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPS 398
Query: 510 NRXXXXXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKR 331
+ P PP P GG
Sbjct: 399 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPS 458
Query: 330 GXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
G P PP GP P GGP P
Sbjct: 459 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 499
Score = 33.5 bits (73), Expect = 0.22
Identities = 32/156 (20%), Positives = 34/156 (21%)
Frame = -2
Query: 675 GGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPKNRXXX 496
GG P P GG P S G P PP GG P
Sbjct: 194 GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 253
Query: 495 XXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKRGXKKX 316
+ P PP P GG G +
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 315 XXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
P PP GP P GGP P
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 349
Score = 33.1 bits (72), Expect = 0.29
Identities = 32/156 (20%), Positives = 33/156 (21%)
Frame = -2
Query: 675 GGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPKNRXXX 496
GG P P GG P S G P PP GG P
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 495 XXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKRGXKKX 316
+ P PP P GG G
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 433
Query: 315 XXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
P PP GP P GGP P
Sbjct: 434 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 469
Score = 33.1 bits (72), Expect = 0.29
Identities = 34/161 (21%), Positives = 35/161 (21%), Gaps = 6/161 (3%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKX------PPGGGXKXXPPPK 511
G P P P G P G P G P GG PP GG P
Sbjct: 354 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPS 413
Query: 510 NRXXXXXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKR 331
+ P PP P GG
Sbjct: 414 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPS 473
Query: 330 GXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
G P PP GP P GGP P
Sbjct: 474 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 514
Score = 32.3 bits (70), Expect = 0.50
Identities = 36/156 (23%), Positives = 36/156 (23%), Gaps = 1/156 (0%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPKNRXXXX 493
G P P P G P G P G P GG PPG PP
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGG----PPGPFGPSGAPPSG----- 194
Query: 492 XXXXXXXGXXXXXXXXXXXXGFXNXXXPP-XXPPXXGKKKXXPXGGGKXXXXXKRGXKKX 316
F PP PP P GG G
Sbjct: 195 -GPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 253
Query: 315 XXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
P PP GP P GGP P
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 289
Score = 29.9 bits (64), Expect = 2.7
Identities = 33/161 (20%), Positives = 34/161 (21%), Gaps = 6/161 (3%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKX------PPGGGXKXXPPPK 511
G P P P G P G P G P GG PP GG P
Sbjct: 369 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPS 428
Query: 510 NRXXXXXXXXXXXGXXXXXXXXXXXXGFXNXXXPPXXPPXXGKKKXXPXGGGKXXXXXKR 331
+ P PP P GG
Sbjct: 429 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPS 488
Query: 330 GXKKXXXXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXP 208
G P PP GP P G P P
Sbjct: 489 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVP 529
Score = 28.3 bits (60), Expect = 8.2
Identities = 30/143 (20%), Positives = 32/143 (22%), Gaps = 2/143 (1%)
Frame = -2
Query: 630 GGXGPXGXPGXKNXSRGXPXXGGKXKXP-PGGGXKXXPPPKNRXXXXXXXXXXXGXXXXX 454
G GP PG G P G P P + P R
Sbjct: 72 GPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSPHSDAPEPSAATD 131
Query: 453 XXXXXXXGFXNXXXPPXX-PPXXGKKKXXPXGGGKXXXXXKRGXKKXXXXPNXQKXXXXP 277
+ PP PP P GG G P P
Sbjct: 132 GFELVFGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAP 191
Query: 276 PXLXGGGPXXPXXXXXGGGPXXP 208
P GP P GGP P
Sbjct: 192 PSGGPPGPFNPSEAPPSGGPTGP 214
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP 520
GGGG P G G G P G P GG PPG G P
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGP 211
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Frame = -2
Query: 654 TPXXPXXXGGXGPXGXPGXK-----NXSRGXPXXGGKXKXPPGGGXKXXPPP 514
T P GG P G PG + G P G PPG G PPP
Sbjct: 152 TGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP 520
GGGG P G G G P G P GG PPG G P
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGP 491
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Frame = -2
Query: 654 TPXXPXXXGGXGPXGXPGXK-----NXSRGXPXXGGKXKXPPGGGXKXXPPP 514
T P GG P G PG + G P G PPG G PPP
Sbjct: 432 TGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPP 514
G GGP P P G G G P +G P GG PPGG PPP
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPP------QGGP--GGFGPPPPGGPGAYGPPP 448
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +2
Query: 515 GGGXXFXPPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPP 676
GG + PPP G P G P+ PG GP PP G G G PP
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQG---GPGG-FGPPPPGGPGAYGPPPTGFPP 453
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +2
Query: 539 PPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPP 673
PPG P G P+ PG P G PP G GPP
Sbjct: 386 PPGAFAPPPSAFGAPQ----GPGGPGGYGPPPPGGPGAPGSYGPP 426
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPK 511
P P G GP G PG K+ S G P G K GG PPP+
Sbjct: 231 PGAPGDQGENGPDGAPG-KSGSDGQP--GAPGKEGSRGGCDHCPPPR 274
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPK 511
P P G GP G PG K+ S G P G K GG PPP+
Sbjct: 284 PGAPGDQGENGPDGAPG-KSGSDGQP--GAPGKEGSRGGCDHCPPPR 327
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -2
Query: 654 TPXXPXXXGGXGPXGXPG--XKNXSRGXPXXGGKXKXP-PGGGXKXXPPPK 511
TP P G GP G PG K+ G P G P GGG + P P+
Sbjct: 256 TPGNPGQDGEQGPAGEPGRDGKDGQPGRPGQPGPPGEPGTGGGCEHCPTPR 306
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = -2
Query: 678 GGGGPXXK---TPXXPXXXGGXGPXGXPG--XKNXSRGXPXXGGKXKXPPG 541
GG GP TP P G GP G PG + G P GG PG
Sbjct: 136 GGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPG 186
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGG 538
GGP TP P GG G G PG G GG+ GG
Sbjct: 116 GGPG--TPGGPGNPGGLGGPGNPGGPGTPGGPGTPGGQPHGTAGG 158
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 621 GPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP 520
GP G PG K +G P GG+ P GG P
Sbjct: 253 GPRGNPGEKG-DKGEPGEGGQRGYPGNGGLSGQP 285
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 621 GPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP 520
GP G PG K +G P GG+ P GG P
Sbjct: 253 GPRGNPGEKG-DKGEPGEGGQRGYPGNGGLSGQP 285
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G+ PG PP
Sbjct: 206 PGPPGPAGPPGPSGQPG-SNGNAGAPGAPGQVVDVPGTPGPAGPP 249
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G+ PG PP
Sbjct: 202 PGPPGPAGPPGPSGQPG-SNGNAGAPGAPGQVVDVPGTPGPAGPP 245
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G+ PG PP
Sbjct: 205 PGPPGPAGPPGPAGQPG-SNGNAGAPGAPGQVVDVPGTPGPAGPP 248
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G+ PG PP
Sbjct: 205 PGPPGPAGPPGPAGQPG-SNGNAGAPGAPGQVVDVPGTPGPAGPP 248
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G+ PG PP
Sbjct: 205 PGPPGPAGPPGPAGQPG-SNGNAGAPGAPGQVVDVPGTPGPAGPP 248
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G+ PG PP
Sbjct: 205 PGPPGPAGPPGPAGQPG-SNGNAGAPGAPGQVVDVPGTPGPAGPP 248
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
G GP P P G GP G PG K G P G PPG + PP
Sbjct: 219 GDSGPPGP-PGPPGAPGNDGPPGPPGPK----GAPGPDG----PPGADGQSGPP 263
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = -2
Query: 666 PXXKTPXXPXXXGGXGPXGXPGXKNXS--RGXPXXGGKXKXPPGGGXKXXPPP 514
P P P G GP G PG S G P G+ P G K P P
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGP 191
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXP-PGGGXKXXPPPK 511
G G P P G GP G PG + G P G+ P GGG PPP+
Sbjct: 253 GSAGASEPGPAGPA--GDAGPDGAPG----NAGAPGAPGEAGAPGSGGGCDHCPPPR 303
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGG 538
G G +TP P G GP G PG G P G + P G
Sbjct: 222 GAPGQVTETPGTPGPAGAAGPPGPPG----PAGNPGSAGASEPGPAG 264
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
G GP P P G GP G PG K G P G PPG + PP
Sbjct: 219 GDSGPPGP-PGPPGAPGNDGPPGPPGPK----GAPGPDG----PPGADGQSGPP 263
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = -2
Query: 666 PXXKTPXXPXXXGGXGPXGXPGXKNXS--RGXPXXGGKXKXPPGGGXKXXPPP 514
P P P G GP G PG S G P G+ P G K P P
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGP 191
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXP-PGGGXKXXPPPK 511
G G P P G GP G PG + G P G+ P GGG PPP+
Sbjct: 263 GSAGASEPGPAGPA--GDAGPDGAPG----NAGAPGAPGEAGAPGSGGGCDHCPPPR 313
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGG 538
G G +TP P G GP G PG G P G + P G
Sbjct: 232 GAPGQVTETPGTPGPAGAAGPPGPPG----PAGNPGSAGASEPGPAG 274
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGK-XKXPPG 541
P GG GP G PG P GG+ PPG
Sbjct: 177 PGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPG 214
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 539 PPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PP PP G P P GP PP+ G PPPP
Sbjct: 699 PPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGG 538
G GGP P G GP G PG + + G P GG P GG
Sbjct: 288 GQGGPGMPGSFPPGAPGPGGP-GMPG--SFAPGAPGPGGPGGYPSGG 331
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP 520
G P ++ P G GP G PG +N + G P G P G P
Sbjct: 201 GAPGTRSVGRPGTAGSPGPQGPPG-QNGNDGQPGNDGAPGQPGQPGPDGHP 250
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGG 535
G GP P P GG GP G PG S G P G P G
Sbjct: 151 GPKGPNGN-PGAPAQGGGQGPPGPPGPAG-SAGSPGQAGAPGNPGSPG 196
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGG 535
G GP P P GG GP G PG S G P G P G
Sbjct: 151 GPKGPNGN-PGAPAQGGGQGPPGPPGPAG-SAGSPGQAGAPGNPGSPG 196
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 563 PPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPP 676
PP P PG P P P G G GPPP
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPP 149
Score = 28.7 bits (61), Expect = 6.2
Identities = 37/159 (23%), Positives = 40/159 (25%), Gaps = 1/159 (0%)
Frame = -2
Query: 669 GPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPKNRXXXXX 490
GP K P G GP G PG K G P G G P P
Sbjct: 146 GPPPKPPCQKCPPGPPGPAGPPGPK----GLPGPQGDAGTSGQDGVPGLPGPPG----PS 197
Query: 489 XXXXXXGXXXXXXXXXXXXGFXNXXXP-PXXPPXXGKKKXXPXGGGKXXXXXKRGXKKXX 313
G N P P PP + P GK K G
Sbjct: 198 GPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLP 257
Query: 312 XXPNXQKXXXXPPXLXGGGPXXPXXXXXGGGPXXPPQRG 196
P + P G GP P PP+ G
Sbjct: 258 GDPGEKGSDGLPGPHGGTGPRGPPGQPGSCDHCPPPRTG 296
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = -2
Query: 666 PXXKTPXXPXXXGGXGPXGXPGXKN--XSRGXPXXGGKXKXPPGGGXKXXPPP 514
P P P G GP G PG + G P G P G K P P
Sbjct: 144 PITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGP 196
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
P P G GP G PG N + G P G PG PP
Sbjct: 203 PGPPGPAGPPGPSGQPG-SNGNAGAPGAPGHVVDVPGTPGPAGPP 246
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVF----XXGPPPP 679
PPP G PP G P G P P PP+ G G PPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPP--RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXP--XGPXPPKXXGXXGVFXXGPPPPXXXXK 694
PPP G PP G P G P PP+ G G PPP K
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 336
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP PP G P P P PP G G PPP
Sbjct: 257 PPPAAGSPPPPRTGSP-----PPPPTGSPPPPPAGGSPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVF----XXGPPPP 679
PPP G PP G P G P P PP+ G G PPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPP--RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXP--XGPXPPKXXGXXGVFXXGPPPPXXXXK 694
PPP G PP G P G P PP+ G G PPP K
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 357
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP PP G P P P PP G G PPP
Sbjct: 278 PPPAAGSPPPPRTGSP-----PPPPTGSPPPPPAGGSPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVF----XXGPPPP 679
PPP G PP G P G P P PP+ G G PPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPP--RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXP--XGPXPPKXXGXXGVFXXGPPPPXXXXK 694
PPP G PP G P G P PP+ G G PPP K
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 342
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPPP 679
PPP PP G P P P PP G G PPP
Sbjct: 263 PPPAAGSPPPPRTGSP-----PPPPTGSPPPPPAGGSPPPPRAGSPPP 305
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXG-XXGVFXXGPP 673
P P G P G P+ + G P P PP G G+ GPP
Sbjct: 213 PGPKGPRGTPGPTG-PKNFYITSGPPGPPGPPGPPGNPGGIGPRGPP 258
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXK 529
G P P P G GP G PG + G P G P G K
Sbjct: 202 GQPGQDAPSEPITPGAPGPQGAPGPQGPP-GQPGQPGHDGQPGAPGPK 248
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXK 529
G P P P G GP G PG + G P G P G K
Sbjct: 169 GQPGQDAPSEPITPGAPGPQGTPGPQGPP-GQPGQPGHDGQPGAPGPK 215
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXK 529
G P P P G GP G PG + G P G P G K
Sbjct: 202 GQPGQDAPSEPITPGAPGPQGTPGPQGPP-GQPGQPGHDGQPGAPGPK 248
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 651 PXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXK 529
P P G GP G PG N S G P G P G K
Sbjct: 222 PGAPGKAGPAGPAGGPG-NNGSAGTPGPAGPAGNPGTPGNK 261
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -2
Query: 675 GGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPP 514
GG P P G GP G G + + G P G+ P G + P P
Sbjct: 209 GGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGP 262
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -2
Query: 675 GGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPP 514
GG P P G GP G G + + G P G+ P G + P P
Sbjct: 209 GGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGP 262
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGK-XKXPPGGGXK 529
G P KT P G GP G PG + G + PPG K
Sbjct: 198 GAPGTKTTNAPGEPGPAGPPGPPGPNGEAGAGSGPGPEGPAGPPGPNGK 246
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 536 PPPGGXXXXPPXXGXPREXFFXPGXPXGPXPPKXXGXXGVFXXGPPP 676
P P G P G P PG P P PP G G PPP
Sbjct: 281 PGPQGPPGDPGIDGAPGN----PGSPGEPGPPGQPGAGGGCDHCPPP 323
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPP 517
GGG P P G G G PG K + G P GK P K PP
Sbjct: 100 GGGCTGCCNPGPPGPGGSPGKPGKPG-KPGAPGAPGAAGKGASAPCEA-KTPPP 151
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = -2
Query: 672 GGPXXKTPXXPXXXGGX-GPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXP--PP 514
G P P P G GP G PG + + G P G PPG G K P PP
Sbjct: 143 GPPGPAGPPGPDGNKGPLGPPGPPGPEGPN-GEPGNKG-PAGPPGPGGKPGPAGPP 196
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 678 GGGGPXXKTPXXPXXXGGXGPXGXPGXKNXSRGXPXXGGKXKXPPGGGXKXXPPPKN 508
GGG P G G G PG G PPG PP N
Sbjct: 214 GGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNN 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,319,956
Number of Sequences: 27780
Number of extensions: 198970
Number of successful extensions: 1294
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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