Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_D13
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 29 3.3
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 29 3.3
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 29 3.3
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 29 3.3
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 29 3.3
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 29 3.3
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 29 3.3
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 29 3.3
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 29 3.3
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 435 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 490
Query: 266 HSL 258
H L
Sbjct: 491 HEL 493
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 434 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 489
Query: 266 HSL 258
H L
Sbjct: 490 HEL 492
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 437 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 492
Query: 266 HSL 258
H L
Sbjct: 493 HEL 495
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 434 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 489
Query: 266 HSL 258
H L
Sbjct: 490 HEL 492
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 435 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 490
Query: 266 HSL 258
H L
Sbjct: 491 HEL 493
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 437 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 492
Query: 266 HSL 258
H L
Sbjct: 493 HEL 495
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 434 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 489
Query: 266 HSL 258
H L
Sbjct: 490 HEL 492
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 435 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 490
Query: 266 HSL 258
H L
Sbjct: 491 HEL 493
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 446 TITPQGQFQCHQNQHEVRVGDKHAVAXPDGTAASEECNDESDAPNNHTGHRRYSEAGL*Q 267
T+T Q Q Q H QH + H V+ +G A E D+ D N T ++ + Q
Sbjct: 434 TVTRQLQTQIHSQQHTQHYSNSHHVS--NGHAHDETATDDED--NGATELTNDADQNVPQ 489
Query: 266 HSL 258
H L
Sbjct: 490 HEL 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,440,249
Number of Sequences: 27780
Number of extensions: 222193
Number of successful extensions: 462
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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