Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D11
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-4|AAK84600.1|  265|Caenorhabditis elegans Ribosomal pro...   261   4e-70
AC006729-3|AAM15612.1|  245|Caenorhabditis elegans Ribosomal pro...   250   1e-66
AC084159-4|AAK39366.1|  234|Caenorhabditis elegans Hypothetical ...   120   1e-27
AC084159-5|AAM69075.1|  199|Caenorhabditis elegans Hypothetical ...    99   2e-21
Z49911-4|CAA90127.1|  128|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AL023844-2|CAA19527.1|  163|Caenorhabditis elegans Hypothetical ...    46   3e-05
AF016444-5|AAB65932.1|  330|Caenorhabditis elegans Serpentine re...    36   0.041
AF003386-7|AAB54258.2|  412|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF100669-10|AAM97938.1|  164|Caenorhabditis elegans Dipeptidyl p...    29   6.2  
AF100669-9|AAK39269.1|  605|Caenorhabditis elegans Dipeptidyl pe...    29   6.2  
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    28   8.1  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    28   8.1  

>AC006729-4|AAK84600.1|  265|Caenorhabditis elegans Ribosomal
           protein, large subunitprotein 7A, isoform a protein.
          Length = 265

 Score =  261 bits (640), Expect = 4e-70
 Identities = 117/214 (54%), Positives = 154/214 (71%)
 Frame = +1

Query: 235 NPLFEKRPKNFAVGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 414
           NPLFEKR +NF +GQ IQP +D++RFV+WPKYIR+QRQ A+LQ+RLKVPP INQF   LD
Sbjct: 30  NPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALD 89

Query: 415 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 594
             +A+  FK+L+KYRPE+                         RPNT+R G NT+T+LVE
Sbjct: 90  SQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHGVNTITRLVE 149

Query: 595 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRLGALVHRKTCTCLALTNVE 774
            ++AQLV+IAHDV+P+E+VL LPALCRK  VPY I+KGK  LG +V RKT   +AL +V 
Sbjct: 150 TRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVRRKTTAAVALVDVN 209

Query: 775 SGDRASFSKVVEAIXTNFNERYEELRKHWGGGVL 876
             D+++ +K+VE +  NF+ER+EE+RKHWGGGV+
Sbjct: 210 PEDKSALNKLVETVNNNFSERHEEIRKHWGGGVM 243


>AC006729-3|AAM15612.1|  245|Caenorhabditis elegans Ribosomal
           protein, large subunitprotein 7A, isoform c protein.
          Length = 245

 Score =  250 bits (611), Expect = 1e-66
 Identities = 117/214 (54%), Positives = 154/214 (71%)
 Frame = +1

Query: 235 NPLFEKRPKNFAVGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 414
           NPLFEKR +NF +GQ IQP +D++RFV+WPKYIR+QRQ A+LQ+RLKVPP INQF   LD
Sbjct: 30  NPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALD 89

Query: 415 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 594
             +A+  FK+L+KYRPE+                         RPNT+R G NT+T+LVE
Sbjct: 90  SQSARQAFKLLDKYRPESTEVTK--------------------RPNTVRHGVNTITRLVE 129

Query: 595 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRLGALVHRKTCTCLALTNVE 774
            ++AQLV+IAHDV+P+E+VL LPALCRK  VPY I+KGK  LG +V RKT   +AL +V 
Sbjct: 130 TRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVRRKTTAAVALVDVN 189

Query: 775 SGDRASFSKVVEAIXTNFNERYEELRKHWGGGVL 876
             D+++ +K+VE +  NF+ER+EE+RKHWGGGV+
Sbjct: 190 PEDKSALNKLVETVNNNFSERHEEIRKHWGGGVM 223


>AC084159-4|AAK39366.1|  234|Caenorhabditis elegans Hypothetical
           protein Y73B3A.18a protein.
          Length = 234

 Score =  120 bits (289), Expect = 1e-27
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = +1

Query: 235 NPLFEKRPKNFAVGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 414
           NPLFEKR +NF +GQ IQP +D++RFV+WPKYIR+QRQ A+LQ+RLKVPP INQF   LD
Sbjct: 133 NPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALD 192

Query: 415 KTTAKGLFKILEKYRPET 468
             +A+  FK+L+KYRPE+
Sbjct: 193 SHSARQAFKLLDKYRPES 210


>AC084159-5|AAM69075.1|  199|Caenorhabditis elegans Hypothetical
           protein Y73B3A.18b protein.
          Length = 199

 Score =   99 bits (238), Expect = 2e-21
 Identities = 42/60 (70%), Positives = 51/60 (85%)
 Frame = +1

Query: 235 NPLFEKRPKNFAVGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 414
           NPLFEKR +NF +GQ IQP +D++RFV+WPKYIR+QRQ A+LQ+RLKVPP INQF   LD
Sbjct: 133 NPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALD 192


>Z49911-4|CAA90127.1|  128|Caenorhabditis elegans Hypothetical
           protein M28.5 protein.
          Length = 128

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 21/56 (37%), Positives = 35/56 (62%)
 Frame = +1

Query: 556 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRLG 723
           ++ G N  TK + +  ++++V+A D +P+E++L LP LC    VPY  V+ K  LG
Sbjct: 35  LKKGANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALG 90


>AL023844-2|CAA19527.1|  163|Caenorhabditis elegans Hypothetical
           protein Y48A6B.3 protein.
          Length = 163

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/88 (22%), Positives = 43/88 (48%)
 Frame = +1

Query: 553 TIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRLGALV 732
           T+R G   V K + + +  + ++A +V PI++   +P +C +  +PY  +  + +LG  V
Sbjct: 68  TLREGIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAV 127

Query: 733 HRKTCTCLALTNVESGDRASFSKVVEAI 816
             +  + L         +  + +V EA+
Sbjct: 128 GHRRPSILIFVKPSGDFKELYDEVAEAL 155


>AF016444-5|AAB65932.1|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 6 protein.
          Length = 330

 Score = 35.9 bits (79), Expect = 0.041
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
 Frame = -1

Query: 510 SFSSFP--QPLFPGCFSLRPVFLQNLEKA-LSCSLVQCLGKLV 391
           SF SFP  QP+   C +++P F+ N+EKA + C ++Q  G+++
Sbjct: 163 SFLSFPFSQPVMNYCTAVKPGFVTNIEKAFIGCLIIQIGGRII 205


>AF003386-7|AAB54258.2|  412|Caenorhabditis elegans Hypothetical
           protein F59E12.8 protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 40  DFAFLFRPFSPKVWYTI*VTYLFVA 114
           D  FLF PFS  VW  + +T L VA
Sbjct: 51  DVVFLFHPFSTTVWLLLSLTVLVVA 75


>AF100669-10|AAM97938.1|  164|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 7, isoform b protein.
          Length = 164

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 313 QIWTSHELAECPDQRQ 266
           ++W  +E  ECPDQRQ
Sbjct: 45  EVWVIYETLECPDQRQ 60


>AF100669-9|AAK39269.1|  605|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 7, isoform a protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 313 QIWTSHELAECPDQRQ 266
           ++W  +E  ECPDQRQ
Sbjct: 45  EVWVIYETLECPDQRQ 60


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 21  TIGNSLR--FCFFVSAIFAESLVYDLGHVSFR 110
           TI NSL+  F F    +FAE +  D+GH  +R
Sbjct: 776 TISNSLQGLFIFLFHVVFAEKMRKDVGHWMYR 807


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 21  TIGNSLR--FCFFVSAIFAESLVYDLGHVSFR 110
           TI NSL+  F F    +FAE +  D+GH  +R
Sbjct: 778 TISNSLQGLFIFLFHVVFAEKMRKDVGHWMYR 809


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 21  TIGNSLR--FCFFVSAIFAESLVYDLGHVSFR 110
           TI NSL+  F F    +FAE +  D+GH  +R
Sbjct: 776 TISNSLQGLFIFLFHVVFAEKMRKDVGHWMYR 807


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 21  TIGNSLR--FCFFVSAIFAESLVYDLGHVSFR 110
           TI NSL+  F F    +FAE +  D+GH  +R
Sbjct: 778 TISNSLQGLFIFLFHVVFAEKMRKDVGHWMYR 809


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,329,863
Number of Sequences: 27780
Number of extensions: 353741
Number of successful extensions: 1002
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)