Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_D10
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 30 0.51
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 29 0.89
SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom... 28 1.6
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 28 2.1
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 27 3.6
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 27 3.6
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 4.7
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 4.7
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 26 6.3
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 29.9 bits (64), Expect = 0.51
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 212 KRHKTSEQASALRHYSSHRYSDCMQHHNPMYERYAKHAEIPQ 337
KRH + + RHY S+ D ++ E Y++ +E+P+
Sbjct: 205 KRHVDNYNENRRRHYDSYSSYDELERRRSSNESYSRRSELPR 246
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 52 IYNLSITVIMFPVILXFS*FFVLTLRAILGLSKKIIYPWISRF 180
+ L+ I+ P+IL S VL+L +GL I+Y W F
Sbjct: 299 VAQLAKETIIRPIILSISEPIVLSLNIYIGLIYSILYLWFEAF 341
>SPCC1223.08c |dfr1||dihydrofolate reductase
Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +3
Query: 78 HVSRHFXFFIVFCAYTSSHPRLIEKDHLSVDFPVCSRDCWGAVPSKDTRPLNKPVPYVII 257
H+ + +F + T S +L E ++ + R C+ ++P K+ RPL + VI
Sbjct: 256 HIKQEMAYFANVTSSTESSGQLEEGKSKIMNVVIMGRSCYDSLPKKN-RPLKDRINIVIT 314
Query: 258 HHT 266
++
Sbjct: 315 RNS 317
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 73 VIMFPVILXFS*FFVLTLRAILGLSKKIIYPWISRF 180
+++ P+IL S VL+L +GL I+Y W F
Sbjct: 306 ILVRPIILCVSEPIVLSLTIYIGLVYSILYLWFEAF 341
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = -2
Query: 526 FFVVANCSAGGVSTLQSPIRQMPMLNLLAG-PA*IP---MTFHPRPSYATPSPPTQKWYP 359
F +++ C V + + + N L G PA I +T PS S + WY
Sbjct: 274 FHLLSRCGKHAVQNIHKILLPIFQKNFLTGFPAEITNLVLTHLDAPSLCAVSQVSHHWYK 333
Query: 358 MSPQPKELWYFCMLR 314
+ +ELW L+
Sbjct: 334 LVSSNEELWKSLFLK 348
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 663 QDDNYPRLKSLPAALLPDILSS*PDC 586
QD++Y R+ + LPDIL + P C
Sbjct: 306 QDESYCRICTQSCVTLPDILEAFPSC 331
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = -2
Query: 538 VDRSFFVVANCSAGGVSTLQSPIRQMPMLNLLAGPA*IPMTFHPRPSYATPSPPTQKWYP 359
VD S A+ + ++ QS MP L L P IP R + P P Q +
Sbjct: 196 VDPSTMADAHNAHSSLTPPQSGYSSMPSLPYLQQPFQIPSQRFSRQQQSHPFPAAQ--HA 253
Query: 358 MSPQPKELWYF 326
++ QP+ L+ F
Sbjct: 254 VNGQPQALYPF 264
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 463 MPMLNLLAGPA*IPMTFHPRPSYATPSP-PTQKWYPMSP 350
MPM+N+ GP P+ P P SP P P +P
Sbjct: 274 MPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAATIPGAP 312
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 358 MSPQPKELWYFCMLRISLIHWVVVLHT 278
MS QP +Y +R S+I+W+V +HT
Sbjct: 164 MSAQP---YYVTEMRASVINWIVGVHT 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,381,784
Number of Sequences: 5004
Number of extensions: 70688
Number of successful extensions: 169
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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