Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D09
         (1084 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.032
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.73 

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect(2) = 0.032
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 793 PPPPPPPP 816
           PPPPPPPP
Sbjct: 783 PPPPPPPP 790



 Score = 26.6 bits (56), Expect = 1.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 793 PPPPPPPP 816
           PPPPPPPP
Sbjct: 784 PPPPPPPP 791



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 909 PPPPPPP 929
           PPPPPPP
Sbjct: 783 PPPPPPP 789



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 910 PPPPPPP 930
           PPPPPPP
Sbjct: 783 PPPPPPP 789



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 909 PPPPPPP 929
           PPPPPPP
Sbjct: 784 PPPPPPP 790



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 910 PPPPPPP 930
           PPPPPPP
Sbjct: 784 PPPPPPP 790



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 909 PPPPPPP 929
           PPPPPPP
Sbjct: 785 PPPPPPP 791



 Score = 23.8 bits (49), Expect(2) = 0.032
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 910 PPPPPPP 930
           PPPPPPP
Sbjct: 785 PPPPPPP 791



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 890 PPPPPPXXXGGGG 852
           PPPPPP     GG
Sbjct: 786 PPPPPPSSLSPGG 798


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 12/58 (20%)
 Frame = +1

Query: 793 PPPPPP------------PPXXXXXXXXFFXXPPPPXXXGGGGGGREXKXXPPPPPPP 930
           PPPPPP            PP        FF   P       G         PP PPPP
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588



 Score = 27.5 bits (58), Expect = 0.73
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +1

Query: 793 PPPPPPPPXXXXXXXXFFXXPPPPXXXGGGGGGREXKXXPPP 918
           PP PPPPP            PPP    GG  GG      P P
Sbjct: 582 PPAPPPPPP---------MGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.4 bits (53), Expect = 3.0
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
 Frame = +1

Query: 874 GGGGGGREXKXXP--PPPPPP 930
           G G  GR+    P  PPPPPP
Sbjct: 515 GAGYDGRDLTGGPLGPPPPPP 535



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 909 PPPPPPP 929
           PPPPPPP
Sbjct: 530 PPPPPPP 536



 Score = 21.4 bits (43), Expect(2) = 5.5
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 852 PPPPXXXGGGGGXERXKXXPPP 917
           PPPP   GG       +  PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551



 Score = 21.0 bits (42), Expect(2) = 5.5
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 909 PPPPPP 926
           PPPPPP
Sbjct: 585 PPPPPP 590


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,096
Number of Sequences: 2352
Number of extensions: 11364
Number of successful extensions: 336
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 121274205
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)