Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_D07
(899 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.22
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 31 0.22
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 28 2.1
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 3.6
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 3.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 3.6
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.6
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 4.8
SPAC824.03c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 8.4
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 8.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 8.4
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -2
Query: 745 SASSLMLTAYVVASTAFAISLVXWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATG 566
S+SS TA +S++ IS + S PTSTS T+ S +S SS + +S S++
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 565 LLLSS 551
SS
Sbjct: 315 SSFSS 319
Score = 26.2 bits (55), Expect = 6.3
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -2
Query: 706 STAFAISLVXWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATGL----LLSSGCFC 539
ST+ IS + S PTSTS T+ S +S SS + + S+ S++ SS
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 538 FSGKVIFNTSFS*TQLPSEFTS 473
S ++SFS T S+ +S
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSS 366
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 31.1 bits (67), Expect = 0.22
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 477 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTSTNVSREEMEFTTESNV--R 647
VNS G+ E + F ++ ++ E+ K + P + S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPNPFYN---SKEESEPLAAHGYIYR 379
Query: 648 DVDVGLETAXKTNEIAKAVEATTYAVNIRDDAEFLPI 758
DVD+ LET K ++ E Y N +D +++ I
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQYISI 416
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +3
Query: 564 RPVAEPTETTSTNVSREEMEFTTESNVRDVDVGLETAXKTNEIAKAVEATTYAVNIRDDA 743
R + ++ V E+ E T + DV++ + + + N +A+ + T+ + DD
Sbjct: 118 RQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
Query: 744 E 746
E
Sbjct: 178 E 178
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 125 AAVSAAPQYYHGSSHWPYHHYXPVQSL 205
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -2
Query: 730 MLTAYVVASTAFAI--SLVXWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATGLLL 557
++ + V A+ +F + + V WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 213 ESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDIN 392
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 393 VKAKN 407
K N
Sbjct: 163 SKKLN 167
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 3.6
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = -2
Query: 763 YGIGKNSASSLMLTAYVVASTAFAISLVXWAVSKPTSTS---RTLL---SVVNSISSRLT 602
Y + ++S +S++ AY+ S + S V ++ PTS+S +LL S+ S SS
Sbjct: 387 YSVVQSSLASIISNAYIATSKSGLNSGVSTLLASPTSSSTFVTSLLRRSSIDGSASSSSA 446
Query: 601 FVEVVSVGSAT 569
+ V +V S+T
Sbjct: 447 SLAVPTVSSST 457
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 534 LKQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDVD 656
+K ++PE + +PV + ST + +E E T +++V +
Sbjct: 908 IKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTE 948
>SPAC824.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 785 HXYLIKLIWNRQELRIVSDVDSVR 714
H Y+ + +WN Q L I D+ SVR
Sbjct: 168 HSYMFQFVWNHQALAIFPDL-SVR 190
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 258 EMQHLDNMMKELSLKFPSIINEGRV 332
E+++L NM+ EL KFP + GR+
Sbjct: 1509 EVEYLVNMVDELLNKFPDVNFTGRI 1533
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 745 SASSLMLTAYVVASTAFAISLVXWAVSKPTSTS 647
S S+ + +A+T+F SLV A + P+STS
Sbjct: 463 SVSATPTVSMSIAATSFGSSLVLTASASPSSTS 495
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -2
Query: 745 SASSLMLTAYVVASTAFAISLVXWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATG 566
S SS ++ +++S S++ + S PTS+S S + +ISS ++ + S S+
Sbjct: 520 STSSSTPSSSIISSPM--TSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVS 577
Query: 565 LLLSS 551
+LSS
Sbjct: 578 SILSS 582
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,100,585
Number of Sequences: 5004
Number of extensions: 61137
Number of successful extensions: 209
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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