Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D05
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.9  
02_01_0123 + 896128-896429,896578-896608,896903-896995,897096-89...    29   5.2  
11_01_0712 - 5844291-5844474,5844722-5844777,5844861-5844959,584...    28   9.1  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 267  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 365
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>02_01_0123 +
           896128-896429,896578-896608,896903-896995,897096-897158,
           897279-897390,897947-898032,898845-898903,898990-899092,
           899182-899242,899472-899554,899635-899715,900018-900077
          Length = 377

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 592 NKMDYVKMMDGCLDEKICYNYGIIKENEQFRNVRQLFQFPDLPQQRRQNCL 744
           N   Y    D  +D  I     + ++ ++ +  R    FPDLP++RR + L
Sbjct: 106 NISSYKGSSDEFIDANIQLALAVARKLKELKGTRSCIVFPDLPEKRRASQL 156


>11_01_0712 -
           5844291-5844474,5844722-5844777,5844861-5844959,
           5845056-5845137,5845626-5845760,5845844-5846011,
           5846127-5846310,5848114-5848189
          Length = 327

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 664 KENEQFRNVRQLFQFPDLPQQRRQNC 741
           +ENEQF N +   +FP++PQQ    C
Sbjct: 200 EENEQFIN-KICLEFPEVPQQNGDEC 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,929,385
Number of Sequences: 37544
Number of extensions: 429893
Number of successful extensions: 1037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)