Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D03
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72509-5|CAA96649.1|  294|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U23510-2|AAC46787.1|  250|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U23510-1|AAN60495.1|  245|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z72509-5|CAA96649.1|  294|Caenorhabditis elegans Hypothetical
           protein F32G8.5 protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 499 LTRTPASQPAVWSRRNSVTEDRTSASRQSSAMIGDPEDP 615
           +  +P SQP  +SR    TE + + S+ ++  +G P  P
Sbjct: 61  INNSPPSQPTYFSRLARSTEQKCNCSQANNCPVGPPGPP 99


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 187  SQSDTRVTSPGTNKWEEGRSSARWAKTMMGFLVKP 291
            S  +TR  + GTNK  +GR+  R     +G ++KP
Sbjct: 3192 SDEETRTRNKGTNKRRDGRNDGR--NMNLGSIIKP 3224


>U23510-2|AAC46787.1|  250|Caenorhabditis elegans Hypothetical
           protein R12C12.9a protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 6   FPYHHTIGNPLRX*HSCLKQRNLSQVKMNSKLLYFFATVLVCVNAEVYWEYEEGYPISGH 185
           F ++   GNP    H CL +R L+ V     +    A  +V +   V+W + +G   S H
Sbjct: 103 FDFNDKKGNPS---HLCLVRRKLAWV-----MFLVIAVYVVVLGIAVFWAWTDGGAASKH 154

Query: 186 F 188
           F
Sbjct: 155 F 155


>U23510-1|AAN60495.1|  245|Caenorhabditis elegans Hypothetical
           protein R12C12.9b protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 6   FPYHHTIGNPLRX*HSCLKQRNLSQVKMNSKLLYFFATVLVCVNAEVYWEYEEGYPISGH 185
           F ++   GNP    H CL +R L+ V     +    A  +V +   V+W + +G   S H
Sbjct: 103 FDFNDKKGNPS---HLCLVRRKLAWV-----MFLVIAVYVVVLGIAVFWAWTDGGAASKH 154

Query: 186 F 188
           F
Sbjct: 155 F 155


>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 339 QAYGTRVLGPAGDSTNYGGRLDWANKNAEAAIDINRQIGGR-SGMTATGSGVWDLDKNTR 515
           QA   R+LGP G S     R   + K+   A   + + GG+ +G     S V  +D+   
Sbjct: 166 QALLRRILGPQGLSWISHDRETASRKSVSIAYSNDLEAGGKGNGAIGDDSTVPLMDEKDD 225

Query: 516 LSAGGMVSKEFGHRR 560
            S G ++ +E  H +
Sbjct: 226 NSGGRLIRREILHEK 240


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 339 QAYGTRVLGPAGDSTNYGGRLDWANKNAEAAIDINRQIGGR-SGMTATGSGVWDLDKNTR 515
           QA   R+LGP G S     R   + K+   A   + + GG+ +G     S V  +D+   
Sbjct: 166 QALLRRILGPQGLSWISHDRETASRKSVSIAYSNDLEAGGKGNGAIGDDSTVPLMDEKDD 225

Query: 516 LSAGGMVSKEFGHRR 560
            S G ++ +E  H +
Sbjct: 226 NSGGRLIRREILHEK 240


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,628,295
Number of Sequences: 27780
Number of extensions: 413453
Number of successful extensions: 1126
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)