Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_D02
         (978 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        31   4.8  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     31   4.8  

>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 805 PRVPAKFRXPGPXFXQHPTXXXEPPXXDPXXSPXEXSXPSXNTPXXXXPTXXXXPPP 975
           P  P     P P     PT   +PP   P   P   S P    P    P     PPP
Sbjct: 84  PEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 140


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 805 PRVPAKFRXPGPXFXQHPTXXXEPPXXDPXXSPXEXSXPSXNTPXXXXPTXXXXPPP 975
           P  P     P P     PT   +PP   P   P   S P    P    P     PPP
Sbjct: 629 PEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 685


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,416,041
Number of Sequences: 237096
Number of extensions: 1160634
Number of successful extensions: 2393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2353
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13047299170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)