Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_C21
(924 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 36 0.060
05_01_0142 - 940421-940701,941262-941574 34 0.14
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 32 0.56
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.98
07_01_0479 + 3606663-3607448 31 0.98
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.7
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 29 3.9
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 5.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.9
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 9.1
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 28 9.1
11_06_0081 + 19886848-19888050,19888243-19888896 25 9.9
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 35.5 bits (78), Expect = 0.060
Identities = 28/80 (35%), Positives = 28/80 (35%)
Frame = -2
Query: 689 PPGFPXCXLGXPPGGGXXWGXGXXXGPLGXGXXXRXXGXXXGFPXQXPXXGGPX*XREGG 510
P P LG PPGG G GPLG G G G P P G GG
Sbjct: 80 PRPLPIKLLGLPPGG------GGAPGPLGGGGARPPGGGGGGGPPSLPPGAG------GG 127
Query: 509 XNXXPPFPXXGAXFSXGGIP 450
PP P G GG P
Sbjct: 128 GGARPPAPGGG---GGGGAP 144
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 34.3 bits (75), Expect = 0.14
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Frame = +1
Query: 487 GKGGCXXXPPSRXYXG---PPXXGXWXGXPXXXPXXRXXXPXPKGPXXX----PXPXKXP 645
G G PP + Y PP G + P P P P G P P P
Sbjct: 22 GVAGGHGYPPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYP 81
Query: 646 PPGGXPXKQXGXPGGG 693
PPGG P + G P G
Sbjct: 82 PPGGYP-QHGGYPPAG 96
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = +1
Query: 457 PPXEKXAPXXGKGGCXXXPPSRXYXGPPXXGXWXGXPXXXPXXRXXXPXPKGPXXXPXPX 636
PP AP G PPS PP G P P P PK P P
Sbjct: 1162 PPSTPSAPPTNSSGSAPSPPSPSQSAPPANTGGGGSP---PPSHGSPPAPKAVQSQPAPK 1218
Query: 637 KXPPPGGXPXKQXGXPGG 690
+ G GG
Sbjct: 1219 RSGDGGSSSDSGSSKEGG 1236
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 0.98
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 476 PPXXGRAXADXXPPXXXTXDPPXXGTGXEXXXXPPXXGXXXPXPKXRVXXPXPXSXPP 649
PP G A PP PP PP P P V P P PP
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPP 609
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.5 bits (68), Expect = 0.98
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 604 PKGPXXXPXPX-KXPPPGGXPXKQXGXPGG 690
P GP P P + PPP G P + G PGG
Sbjct: 198 PGGPPPPPGPFMRGPPPMGPPQVRPGMPGG 227
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = +1
Query: 535 PPXXGXWXGXPXXXPXXRXXXPXPKGPXXXP---XPXKXPPPGGXPXKQXGXPGG 690
PP P P P PKGP P P PPP G PGG
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 511 PPSRXYXGPPXXGXWXGXPXXXPXXRXXXPXPKGPXXXPXPXKXPPPGGXPXKQXGXPG 687
PP GPP G P P P P P PPP G + PG
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +1
Query: 478 PXXGKGGCXXXPPSRXYXG---PPXXGXWXGXPXXXPXXRXXXPXPKGPXXXPXPXKXPP 648
P G GG PP + G PP P P P P P P P
Sbjct: 1153 PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAP---PM 1209
Query: 649 PGGXPXKQXGXPGG 690
P G P PGG
Sbjct: 1210 PPGVPGGPPPPPGG 1223
>01_06_0747 -
31645136-31646521,31647870-31648142,31649080-31649148,
31649486-31649614
Length = 618
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Frame = +1
Query: 511 PPSRXYXGPPXXGXWXGXPXXXP------XXRXXXPXPKGPXXXPXPXKXPPPGGXPXKQ 672
PPS+ GPP G + G P P P GP P P PG
Sbjct: 495 PPSQGSFGPPSKGGYAGPPQYAPQGSSHGYNTAYGYPPSGPSAAQAPQMPPAPGNVGMSH 554
Query: 673 XG 678
G
Sbjct: 555 PG 556
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +1
Query: 565 PXXXPXXRXXXPXPKGPXXXPXPXKXPP-PGGXPXKQXGXPG 687
P P P PK P P P PP PG P + PG
Sbjct: 174 PGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPG 215
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 460 PXEKXAPXXGKGGCXXXPPSRX-YXGPPXXGXWXGXPXXXPXXRXXXPXPKGPXXXPXPX 636
P K +P K G PP PP G P P P PK P P P
Sbjct: 163 PKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGP---KPKPKPPKPGPKPKPKPPKPGPKPK 219
Query: 637 KXPPPGGXP 663
PP P
Sbjct: 220 PGPPQPWWP 228
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/80 (26%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = +1
Query: 457 PPXEKXAPXXGKG-GCXXXPPSRXYXGPPXXGXWXGXPXXXPXXRXXXPXPKGPXXXPXP 633
PP P G G G PP + P P P P P P
Sbjct: 303 PPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPP--PAPSPSAAGAGSGPPPPPPPAAPAA 360
Query: 634 XKXPPPGGXPXKQXGXPGGG 693
+ P PG P G G G
Sbjct: 361 PRPPGPGPGPPPPPGAAGRG 380
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +1
Query: 514 PSRXYXGPPXXGXWXGXPXXXPXXRXXXPXPKGPXXXPXPXKXPPPGGXPXKQXGXP 684
P GPP + P P P P P P P K P P P
Sbjct: 576 PPEVTPGPPEITPYPSPPEITPSPPEITPYPSPPEVVPSPPKITPYPSPPEVTPSPP 632
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 553 WXGXPXXXPXXRXXXPXPKGPXXXPXPXKXPPPGGXPXKQXGXPGG 690
W P P R P P P P P P P P + G GG
Sbjct: 35 WSAPP---PPARHRAPSPPRPPPPPPPPTQPAPPPPPPARSGGGGG 77
>11_06_0081 + 19886848-19888050,19888243-19888896
Length = 618
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 384 PPPPPXVPXPXT 349
PPPPP P P T
Sbjct: 266 PPPPPAAPAPTT 277
Score = 21.8 bits (44), Expect(2) = 9.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 405 VGXXRXSPPPPPXVP 361
V R PPPPP P
Sbjct: 256 VSQLRSPPPPPPPPP 270
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.157 0.563
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,458,727
Number of Sequences: 37544
Number of extensions: 413084
Number of successful extensions: 2351
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2177
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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