Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_C17
(949 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 63 6e-11
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 55 2e-08
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 51 3e-07
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 48 1e-06
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 44 2e-05
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 42 1e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 40 7e-04
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 35 0.015
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 32 0.10
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 32 0.10
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 31 0.24
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 30 0.55
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 29 1.3
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 27 3.9
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 27 3.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 3.9
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 5.1
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 5.1
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 26 6.7
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 26 8.9
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 8.9
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 8.9
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 26 8.9
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 62.9 bits (146), Expect = 6e-11
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Frame = +3
Query: 90 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 269
K + ITGA++GIG+S + + + + + EL SKY + DV
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDV 66
Query: 270 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAI---- 437
+D + G++ ++ +E IDV+INNA L + + I+ VT + T+ L +
Sbjct: 67 SDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTR 126
Query: 438 EIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRVL 617
++ G ++NV S+A +Y +TKSA+ QF++ + R E T +R++
Sbjct: 127 AVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSAL-RKETID-TRIRIM 184
Query: 618 TV 623
V
Sbjct: 185 EV 186
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 54.8 bits (126), Expect = 2e-08
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Frame = +3
Query: 96 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDVTD 275
V ITG++ G+G ++V++ L +G IA A ++ +E +K + DVTD
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIA----CSRAPDTITIE-----HSKLLKLKLDVTD 58
Query: 276 EEHFLGILNAVVQEQGGIDVVINNAA--LMND----SIGIYKKAIEVNVTALITSTLKAI 437
+ + G +D+VINNA L+ + +I + + VN + T +A+
Sbjct: 59 VKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEAL 118
Query: 438 EIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGR 581
+M GKGG ++ +SSVA S + +Y A+K AV S I R
Sbjct: 119 NLM--RESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMR 164
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 50.8 bits (116), Expect = 3e-07
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Frame = +3
Query: 90 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 269
+VV ITGAA GIG+ + ++ + G + +A +DI + SK + ++DV
Sbjct: 6 RVVLITGAAGGIGKVLCKMFTELGDR-VAGIDIVDP----------SKVQDAALALQADV 54
Query: 270 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDS--IGIYKKAIEVNVTALITSTLKAIEI 443
+ + + V+Q G IDV+INNA L +D+ + ++ + +V+ ++
Sbjct: 55 SKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRY 114
Query: 444 MGKHSG--GKGGTVINVSSVAALTQSHV---MPIYFATKSAVLQFSNCIGRPEHFSKTGV 608
+ H GKGG+++N+ SV H+ P Y A K+ + + + + G+
Sbjct: 115 VIPHMAKQGKGGSIVNIGSV----NGHIYLGSPAYSAAKAGLENLTKALA--VRYGPLGI 168
Query: 609 RV 614
RV
Sbjct: 169 RV 170
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 48.4 bits (110), Expect = 1e-06
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Frame = +3
Query: 84 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 263
K K ITG + GIG S+ + G ++ +L + EL K+G + K Y
Sbjct: 8 KGKTTLITGGSGGIGFSIAKAFAAAG-SNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 264 DVTDEEHFLGILNAVVQEQGG-IDVVINNAALMNDSIGIYKKAIEV--NVTAL-ITSTLK 431
+ + + N V+E GG +DV+I NA + + + K ++ V + +
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYY 126
Query: 432 AIEIMGKH--SGGKGGTVINVSSVAALTQ-SHVMPIYFATKSAVLQFSNCI 575
+ G H GKG + S + Y ATK+AV + +
Sbjct: 127 TAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARAL 177
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 44.4 bits (100), Expect = 2e-05
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 8/188 (4%)
Frame = +3
Query: 87 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKS-LQVELNSKYGNKTKFYRS 263
+K +TG +GIG++ + EG + I + EE + + +L + G +
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREG-SDLVISCLPEERDDAEVTRDLIEREGRNCWIWEG 100
Query: 264 DVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGI-------YKKAIEVNVTALITS 422
+ ++ +++ +++ G IDV++NN A + I + + N+ +
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWV 160
Query: 423 TLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKT 602
T AI M G +++N SS+ A + Y +TK A+ F+ G +++
Sbjct: 161 TKAAISHM-----KSGSSIVNCSSINAYVGRPDLLDYTSTKGAITAFTR--GLSNQYAQH 213
Query: 603 GVRVLTVA 626
G+RV VA
Sbjct: 214 GIRVNAVA 221
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 90 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGN-KTKFYRSD 266
KV +TG++ GIG L +G K + + EE + + +++ + + K +F R D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 267 VTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNV 404
+ D E + + ++ + +++NNA +MN + K E+ +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 39.5 bits (88), Expect = 7e-04
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Frame = +3
Query: 78 EWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKY----GNK 245
E +KV+ +TG++ GIG + L + K IA+ ++L ++ + G+
Sbjct: 3 ETAEKVILLTGSSKGIGLATAE-ALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDV 61
Query: 246 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITST 425
T+ ++ + G L++V+ G ++ + A + + I ++K ++N +++ +
Sbjct: 62 TEVGKASIETAIKKFGKLDSVILNAGVLEPI---AKIADADINEWRKLFDINFFSVVETV 118
Query: 426 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTG 605
AI + K GT++ VSS AA+ Y +K+A+ +G E
Sbjct: 119 KYAIPHLRKTK----GTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSEE------ 168
Query: 606 VRVLTVAVHXGV 641
+++VAV GV
Sbjct: 169 PDIMSVAVRPGV 180
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 35.1 bits (77), Expect = 0.015
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Frame = +3
Query: 87 DKVVFITGAATG-IGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 263
+K V ITG + G IG ++ EG + +A E +++ +K G +T +
Sbjct: 4 EKFVLITGCSEGGIGNALALKFHQEGFQVLATARQVE------RMDNLTKAGLQT--LKL 55
Query: 264 DVTDEEHFLGILNAVVQ-EQGGIDVVINNAALMNDSIGI------YKKAIEVNVTALITS 422
DVTDE+ + V + G + +INNA + I K ++VN +I
Sbjct: 56 DVTDEDSVREVEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRM 115
Query: 423 TLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKT 602
KA + + G T++NV+S+ + Y A+K+A+L +SN + R E +
Sbjct: 116 N-KAFQHQLIRAKG---TIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTL-RIE-LAPF 169
Query: 603 GVRVLTV 623
GV+V ++
Sbjct: 170 GVQVTSI 176
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 96 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK 206
+F+TGAA IG +VR LL+ G + + ++ E A K
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENAAK 39
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 32.3 bits (70), Expect = 0.10
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Frame = +3
Query: 96 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV-T 272
V ITG ++G+G+ + +I +G I+ E K L+ G + +DV +
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKG-HQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQS 62
Query: 273 DEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-------VTALITSTLK 431
D ++ I +V ID V++ A ++ S+ + E++ V+A+ S +
Sbjct: 63 DMKNLKSIFESV-----EIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMA 117
Query: 432 AIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVR 611
+E + + ++N+SS + +Y A+K+ + F+ + E SK G+R
Sbjct: 118 ILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLA-AEVASK-GIR 175
Query: 612 VLTVA 626
V ++
Sbjct: 176 VNAIS 180
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 31.1 bits (67), Expect = 0.24
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Frame = +3
Query: 66 KXSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNK 245
K S+ ++ ITG + +G ++++ LD G +A LD E A LQ Y +K
Sbjct: 28 KQSYSCAKGLIVITGGSGILGHAIIQEALDRGFS-VASLDSTEPA-SFLQ------YNSK 79
Query: 246 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAAL--MNDSIGI----YKKAIEVNVT 407
+ ++T ++ G ++++ + +IN AA+ N + I +K E NV
Sbjct: 80 FSALKCNITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVI 139
Query: 408 ALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 557
+ T ++ + V+N++S A + + Y ++K+A++
Sbjct: 140 GQLAITSALFPLLLQDPNPH---VVNIASSLAYFSAMGVGAYSSSKAALV 186
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 29.9 bits (64), Expect = 0.55
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 63 LKXSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQ-VELN 227
++ H ++DK+V G TGI + G KH+ +D++E K++Q VE+N
Sbjct: 47 MQNPHLFRDKIVLDVGCGTGI---LSMFCARAGAKHVYGVDMSEIIHKAVQIVEVN 99
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 28.7 bits (61), Expect = 1.3
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Frame = +3
Query: 90 KVVFITGAATGIGESVVRILL--DEGVKHIAILDI-AEEAGKSLQVELNSKYGNKTKFYR 260
K VF+TGA +G ++R L+ +K IA++ +EE G + + YG + +
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNLKVIALVRASSEEHGLKRLKDSCTAYGVWDESWA 1064
Query: 261 SDVTDEEHFLGILNAVVQEQGG------IDVVINNAALMNDSIGIYKKAIEVNVTALITS 422
++ L + N ++E+ +D VI+N AL++ + Y K NV IT+
Sbjct: 1065 QKISVVNGDLALENWGIEERKWNKLTEVVDYVIHNGALVH-WVYPYSKLRGPNVMGTITA 1123
Query: 423 TLKAIEIMGKHSGGKGGTVINVSSVAAL 506
LK + GKG ++ VSS + +
Sbjct: 1124 -LKLCSL------GKGKSLSFVSSTSTV 1144
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 27.1 bits (57), Expect = 3.9
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +3
Query: 126 GESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYG-----NKTKFY--RSDVTDEEH 284
GE VV + L G A++D+ EA K + N +Y ++ FY R+D+T E
Sbjct: 95 GEDVVELQLHGGT---AVVDVTLEAIKQSGIP-NIRYAKPGEFSERAFYNGRADLTQLEG 150
Query: 285 FLGILNAVVQEQ 320
+ ++NA EQ
Sbjct: 151 LIDVINAQTAEQ 162
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 93 VVFITGAATGIGESVVRILLDEGVKHIAIL 182
VV +TG ++GIG+ VV L G + + +L
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 273 DEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKA 389
+ EH L L+ +D +NN + +S+ I+KKA
Sbjct: 1139 ESEHLLNELDDTHSSLSTVDFTVNNTESLINSLKIFKKA 1177
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 229 EFSSTCNDFPASSAMSKIAICLTPSSNNILTTDSPMPVAAPV 104
+F T D + M A +T + N+ TTDSPM A PV
Sbjct: 427 DFKET-EDMNGAEDMHGRAPQITKDNLNLTTTDSPMSEAEPV 467
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 81 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDI 188
+K V + GA GIG +++ LL GVK + I+D+
Sbjct: 23 FKSAKVLLVGAG-GIGCELLKNLLMSGVKEVHIIDL 57
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Frame = +3
Query: 255 YRSD--VTDEEHFLGI----LNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALI 416
+RSD V ++ F+G N + GG+ ++N G+Y+K + N +
Sbjct: 127 FRSDYMVHQDDSFIGCKQVEFNTISVSFGGVSKAVSNLHAYCSQSGLYRKPLTTNYLTVN 186
Query: 417 TSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPI 530
TS + V N++S + + PI
Sbjct: 187 TSVSGICTGISNAVDAYRDYVKNITSKMNIASDNTKPI 224
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 508 VKAATEDTLITVPPLPPLCFPIISMAFN 425
V AAT D I+VP L LC +I+ N
Sbjct: 177 VAAATMDEEISVPKLQDLCIRVIAEYIN 204
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 8.9
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = +3
Query: 273 DEEHFLGILNAV---VQEQGGIDVVINNA--ALMNDSIGIYKKAIEVNVTALITSTLKAI 437
D +F I +V + G IDV++NNA ++ + ++ I + L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 438 E-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 575
+ I G +INVSS+ + +Y+ TK A+ S +
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL 128
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 8.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 325 PPCS*TTALRIPRKCSSSVTSDL*N-FVLLPYFEFSSTCNDFPASSAMSKIAICLTPSSN 149
P T A+ P + ++ S N V P F SST N A ++ S +A L PS+
Sbjct: 355 PTIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPSTA 414
Query: 148 N 146
N
Sbjct: 415 N 415
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 8.9
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = +3
Query: 273 DEEHFLGILNAV---VQEQGGIDVVINNA--ALMNDSIGIYKKAIEVNVTALITSTLKAI 437
D +F I +V + G IDV++NNA ++ + ++ I + L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 438 E-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 575
+ I G +INVSS+ + +Y+ TK A+ S +
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,612,091
Number of Sequences: 5004
Number of extensions: 52520
Number of successful extensions: 167
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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