Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_C16
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 92 7e-19
02_04_0585 - 24088344-24089366,24089833-24090075,24090305-240906... 89 6e-18
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 85 6e-17
06_03_0247 + 18679278-18679319,18679522-18679620,18679897-186801... 73 4e-13
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 64 2e-10
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 30 2.3
05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877 30 2.3
06_02_0177 + 12644270-12644581,12645717-12646054,12646291-12646489 29 4.0
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 29 7.0
03_02_0730 + 10784784-10785341 28 9.3
02_05_0818 + 32004749-32005347,32005905-32006415,32006539-32007300 28 9.3
02_01_0010 - 72857-72877,73237-73419 28 9.3
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 91.9 bits (218), Expect = 7e-19
Identities = 52/118 (44%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Frame = +1
Query: 346 DIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALDEPKYSSMYAQ 525
D + + V+GILNKLTPEKF +LK VI LIFEKA+ EP + MYAQ
Sbjct: 205 DRVLKTVKGILNKLTPEKFDLLKGQLMESGITTADILKDVISLIFEKAVFEPTFCPMYAQ 264
Query: 526 LCKRLSEEAPNF---EPPGQPCTFKLLLLNKCRTEFENRTXXFAAFEDKTLSPEEEER 690
LC L+E+ P+F EP G+ TFK +LLN C+ FE A T +E ER
Sbjct: 265 LCSDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAESLRAEIAKLTGPDQEMER 322
>02_04_0585 -
24088344-24089366,24089833-24090075,24090305-24090655,
24090736-24090823,24091178-24091275,24091813-24092025,
24092150-24092245,24093124-24093195,24093909-24094067
Length = 780
Score = 88.6 bits (210), Expect = 6e-18
Identities = 52/118 (44%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 352 IFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALDEPKYSSMYAQLC 531
+ + V+GILNKLTPEKF +LK VI LIFEKA+ EP + MYAQLC
Sbjct: 207 VLKTVKGILNKLTPEKFDLLKGQLIEAGITTADILKDVISLIFEKAVLEPTFCPMYAQLC 266
Query: 532 KRLSEEAPNF---EPPGQPCTFKLLLLNKCRTEFENRTXXFAAFEDKT-LSPEEEERD 693
L+E+ P+F EP G+ TFK +LLN C+ FE + T L E E RD
Sbjct: 267 FDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGADNLRSEVNKLTGLDQEMERRD 324
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 85.4 bits (202), Expect = 6e-17
Identities = 51/125 (40%), Positives = 66/125 (52%)
Frame = +1
Query: 358 RKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALDEPKYSSMYAQLCKR 537
R+++ ILNKLTP+ F+K L GVI IF+KAL EP + MYA C
Sbjct: 1570 RQLKAILNKLTPQNFEKLFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYANFCFH 1629
Query: 538 LSEEAPNFEPPGQPCTFKLLLLNKCRTEFENRTXXFAAFEDKTLSPEEEERDTSPMQDAR 717
L+ P+F + TFK LLLNKC+ EFE R A DKT EEE + ++ R
Sbjct: 1630 LAGALPDFSEDNEKITFKRLLLNKCQEEFE-RGEREEAEADKT----EEEGEIKQTKEER 1684
Query: 718 QHKVI 732
+ K I
Sbjct: 1685 EEKRI 1689
>06_03_0247 +
18679278-18679319,18679522-18679620,18679897-18680100,
18680334-18680431,18680554-18680641,18680728-18681078,
18682093-18682623
Length = 470
Score = 72.5 bits (170), Expect = 4e-13
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 340 KYDIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALDEPKYSSMY 519
KY ++ + V+GILN LTPEKF +LK VI LI EKA+ EP MY
Sbjct: 139 KYKVL-KTVKGILNLLTPEKFDILKDQLIEAGITRTDILKDVIDLILEKAVAEPTLCPMY 197
Query: 520 AQLCKRLSEEAPNFEPPGQPC---TFKLLLLNKCRTEFENRTXXFAAFEDKTLSPEEEER 690
AQ C L+E F P C TFK L +KC+ FE A + L+ E+E
Sbjct: 198 AQFCSYLNENITAFPPKDTHCEQITFKQALSDKCQQAFEIARNVRA--DIYKLTGREQEM 255
Query: 691 DTSPMQDARQHKVIGDWQL 747
+ + +H+++G +L
Sbjct: 256 ERRDKERLVKHQILGKIRL 274
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 63.7 bits (148), Expect = 2e-10
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +1
Query: 346 DIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALDEPKYSSMYAQ 525
D + + ++ ILN +P+ F +LK VI LIFEK + EP + S YAQ
Sbjct: 389 DEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQ 448
Query: 526 LCKRLSEEAPNFEPPGQPC---TFKLLLLNKCRTEFEN 630
LC L++ F P C TFK L NKC+ FE+
Sbjct: 449 LCTYLNQNLTPFPPEDCDCEEITFKQALSNKCQEIFES 486
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 30.3 bits (65), Expect = 2.3
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 8/137 (5%)
Frame = -3
Query: 603 KQQKLKCARLTRRLEVGSLFAEPLAELCVHRRVLRLVQGFLKNEKDDALED----PVGVQ 436
K + L R L +G + + + H + L + G + LE+ +
Sbjct: 355 KMKSLSERRKLEDLTIGPVLTVTTSSMIEHMKNLLKIPGSKVLFGGEPLENHSIPEIYGA 414
Query: 435 FEPEEIIAQLLKFLRRELVENTTN--LAEYDVVLGISVGHVVMSE**GRDPASPRGDWRP 262
F+P + L + L+ E T + VLG SV + R +P+ W
Sbjct: 415 FKPTAVFVPLSEILKSGNFELVTREIFGPFQEVLGRSVNGTTYAGIRARTTGAPQNHWFG 474
Query: 261 PRGDARGPRL--PRAVR 217
P GD RG + P A++
Sbjct: 475 PAGDPRGAGIGTPEAIK 491
>05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877
Length = 446
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 610 CRTEFENRTXXFAAFE--DKTLSPEEEERDTSPMQDARQHKVIGDWQLEILSESYCSMLX 783
CR E + AAF DK L + S Q R +VIG WQLE + S +
Sbjct: 254 CRWAMEGKLPYVAAFTQVDKLLGSSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIG 313
Query: 784 I 786
+
Sbjct: 314 L 314
>06_02_0177 + 12644270-12644581,12645717-12646054,12646291-12646489
Length = 282
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 452 SSRASSFSFLRKPWTSLSTRRCTHSSASGSAKRLPTSSRRVSRA 583
SS + + S LR+ ++LS RRC HSS++ + R P R A
Sbjct: 3 SSASRAASLLRRTSSALS-RRCAHSSSAAAPSRPPVPLPRFRAA 45
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 510 RVLRLVQGFLKNEKDDALEDPVGVQFEPEEIIAQLLKFLRRELVENTTNLAE 355
++L V+ + +KD+ V PEE IA+L K EL+E L E
Sbjct: 179 QLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEE 230
>03_02_0730 + 10784784-10785341
Length = 185
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 285 SPRGDWRPPRGDARGPR 235
SP W+P GD RGPR
Sbjct: 41 SPPATWQPGEGDVRGPR 57
>02_05_0818 + 32004749-32005347,32005905-32006415,32006539-32007300
Length = 623
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 534 LAELCVHRRVLRLVQGFLKNEKDDALE 454
+AE C H RVL L++ ++ E+D+ ++
Sbjct: 195 IAERCRHLRVLDLIEDYIDEEEDELVD 221
>02_01_0010 - 72857-72877,73237-73419
Length = 67
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 515 CTHSSASGSAKRLPTSSRRVSRAHLSFCCLT 607
C +AS + SS V+ AHL+FCCLT
Sbjct: 21 CFAFTASQQQQSDSCSSAGVAVAHLAFCCLT 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,074,804
Number of Sequences: 37544
Number of extensions: 335583
Number of successful extensions: 1109
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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