Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_C03
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.042
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.042
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.042
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.68
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.68
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.68
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 0.71
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 0.71
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 25 2.4
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 25 2.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 4.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.4
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 23 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G +P P GG PP P G P P G P PPPP
Sbjct: 729 PPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/71 (30%), Positives = 24/71 (33%)
Frame = -1
Query: 812 GISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAPKXXPLFPGGXGPXXFXAGXXPPXTX 633
G+ P+ GG PPPPP P P P GG P G PP
Sbjct: 718 GLPPITGGPPPPPPPGGLP----PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 632 PXEXGKKKXMP 600
P G K P
Sbjct: 774 PPPPGGFKGGP 784
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G +P P GG PP P P P G G P PPPP
Sbjct: 745 PPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKG--GPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G P P GG PP P P P P P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPP----ITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -1
Query: 821 GXXGISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAP----KXXPLFPGGXGPXXFXAG 654
G + P+ GG PPPPP P G G P P PGG P G
Sbjct: 702 GSSALPPITGG--PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGG 757
Query: 653 XXPPXTXP 630
PP P
Sbjct: 758 PPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 908 PXXGPFXGVGPFXGXXXXXXXXXXXXPIWGXXGISPLXGGXXPPPPPPXXP 756
P P G+ P G PI G P G PPPPPP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G +P P GG PP P G P P G P PPPP
Sbjct: 729 PPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/71 (30%), Positives = 24/71 (33%)
Frame = -1
Query: 812 GISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAPKXXPLFPGGXGPXXFXAGXXPPXTX 633
G+ P+ GG PPPPP P P P GG P G PP
Sbjct: 718 GLPPITGGPPPPPPPGGLP----PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 632 PXEXGKKKXMP 600
P G K P
Sbjct: 774 PPPPGGFKGGP 784
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G +P P GG PP P P P G G P PPPP
Sbjct: 745 PPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKG--GPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G P P GG PP P P P P P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPP----ITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -1
Query: 821 GXXGISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAP----KXXPLFPGGXGPXXFXAG 654
G + P+ GG PPPPP P G G P P PGG P G
Sbjct: 702 GSSALPPITGG--PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGG 757
Query: 653 XXPPXTXP 630
PP P
Sbjct: 758 PPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 908 PXXGPFXGVGPFXGXXXXXXXXXXXXPIWGXXGISPLXGGXXPPPPPPXXP 756
P P G+ P G PI G P G PPPPPP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G +P P GG PP P G P P G P PPPP
Sbjct: 312 PPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/71 (30%), Positives = 24/71 (33%)
Frame = -1
Query: 812 GISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAPKXXPLFPGGXGPXXFXAGXXPPXTX 633
G+ P+ GG PPPPP P P P GG P G PP
Sbjct: 301 GLPPITGGPPPPPPPGGLP----PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 632 PXEXGKKKXMP 600
P G K P
Sbjct: 357 PPPPGGFKGGP 367
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G +P P GG PP P P P G G P PPPP
Sbjct: 328 PPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKG--GPPPPPPP 373
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G P P GG PP P P P P P PPPP
Sbjct: 303 PPITGGPPPPPPPGGLPP----ITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -1
Query: 821 GXXGISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAP----KXXPLFPGGXGPXXFXAG 654
G + P+ GG PPPPP P G G P P PGG P G
Sbjct: 285 GSSALPPITGG--PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGG 340
Query: 653 XXPPXTXP 630
PP P
Sbjct: 341 PPPPPPPP 348
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 908 PXXGPFXGVGPFXGXXXXXXXXXXXXPIWGXXGISPLXGGXXPPPPPPXXP 756
P P G+ P G PI G P G PPPPPP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP P P+ G PP P G +P P G SP PPPP
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP-PRAG--SPPPPPPP 303
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G P P PP P+ G P P G + PPP
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = +1
Query: 676 PXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKKX 855
P PP +G S P+ G PP P P GG PP +
Sbjct: 238 PPPPPPKG---SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 856 XXKXPKKGPTPXXGPXXGXFSP----XAPPP 936
P P P P G P +PPP
Sbjct: 295 GSPPPP--PPPRGSPPTGSLPPPQAGGSPPP 323
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -1
Query: 812 GISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAPK--XXPLFPGGXGPXXFXAGXXPPX 639
G PL G PPPP P G R P P P G P AG PP
Sbjct: 245 GSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 638 TXP 630
P
Sbjct: 301 PPP 303
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/89 (25%), Positives = 28/89 (31%)
Frame = +1
Query: 673 GPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKK 852
G PP G G+ P P PP G P G PP +
Sbjct: 278 GSPPPPPAG---GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
Query: 853 XXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
+ P++ P P P G SP PP
Sbjct: 335 QKRQAPERSP-PTGSPPTG--SPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP P P+ G PP P G +P P G SP PPPP
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP-PRAG--SPPPPPPP 324
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G P P PP P+ G P P G + PPP
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = +1
Query: 676 PXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKKX 855
P PP +G S P+ G PP P P GG PP +
Sbjct: 259 PPPPPPKG---SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 856 XXKXPKKGPTPXXGPXXGXFSP----XAPPP 936
P P P P G P +PPP
Sbjct: 316 GSPPPP--PPPRGSPPTGSLPPPQAGGSPPP 344
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -1
Query: 812 GISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAPK--XXPLFPGGXGPXXFXAGXXPPX 639
G PL G PPPP P G R P P P G P AG PP
Sbjct: 266 GSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 638 TXP 630
P
Sbjct: 322 PPP 324
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/89 (25%), Positives = 28/89 (31%)
Frame = +1
Query: 673 GPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKK 852
G PP G G+ P P PP G P G PP +
Sbjct: 299 GSPPPPPAG---GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
Query: 853 XXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
+ P++ P P P G SP PP
Sbjct: 356 QKRQAPERSP-PTGSPPTG--SPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP P P+ G PP P G +P P G SP PPPP
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP-PRAG--SPPPPPPP 309
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +1
Query: 790 PPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
PP G P P PP P+ G P P G + PPP
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = +1
Query: 676 PXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKKX 855
P PP +G S P+ G PP P P GG PP +
Sbjct: 244 PPPPPPKG---SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 856 XXKXPKKGPTPXXGPXXGXFSP----XAPPP 936
P P P P G P +PPP
Sbjct: 301 GSPPPP--PPPRGSPPTGSLPPPQAGGSPPP 329
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -1
Query: 812 GISPLXGGXXPPPPPPXXPXEGXXXWXREXGXXAPK--XXPLFPGGXGPXXFXAGXXPPX 639
G PL G PPPP P G R P P P G P AG PP
Sbjct: 251 GSPPLAGSGSPPPP----PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 638 TXP 630
P
Sbjct: 307 PPP 309
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/89 (25%), Positives = 28/89 (31%)
Frame = +1
Query: 673 GPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKK 852
G PP G G+ P P PP G P G PP +
Sbjct: 284 GSPPPPPAG---GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
Query: 853 XXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
+ P++ P P P G SP PP
Sbjct: 341 QKRQAPERSP-PTGSPPTG--SPPTGRPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.5 bits (58), Expect(2) = 0.71
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 791 GXXPPPPPPXXPXEGXXXWXREXGXXAPKXXPLFPGGXG 675
G PPPPPP P G + P P P G G
Sbjct: 355 GGMPPPPPPRYPSAGPGMYP----PPPPSRPPAPPSGHG 389
Score = 23.0 bits (47), Expect(2) = 0.71
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 803 PLXGGXXPPPPP 768
P GG PPPPP
Sbjct: 338 PGMGGMPPPPPP 349
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.5 bits (58), Expect(2) = 0.71
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 791 GXXPPPPPPXXPXEGXXXWXREXGXXAPKXXPLFPGGXG 675
G PPPPPP P G + P P P G G
Sbjct: 345 GGMPPPPPPRYPSAGPGMYP----PPPPSRPPAPPSGHG 379
Score = 23.0 bits (47), Expect(2) = 0.71
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 803 PLXGGXXPPPPP 768
P GG PPPPP
Sbjct: 328 PGMGGMPPPPPP 339
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 806 SPLXGGXXPPPPPP 765
SPL PPPPPP
Sbjct: 784 SPLTAPIPPPPPPP 797
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 782 PPPPPPXXPXE 750
PPPPPP P +
Sbjct: 794 PPPPPPMLPPQ 804
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 806 SPLXGGXXPPPPPP 765
SPL PPPPPP
Sbjct: 683 SPLTAPIPPPPPPP 696
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 782 PPPPPPXXPXE 750
PPPPPP P +
Sbjct: 693 PPPPPPMLPPQ 703
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 784 FXPPXRGEIPXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
+ PP G P P G P G P G GP F P PPP
Sbjct: 409 YGPPPPGG-PGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -3
Query: 936 GGGGXXGKXPPXGPXXGCXAFFXPFXXXFFSXGXPPXLG-GXXNFPPXGGXEXPXPPP 766
G GG G PP G + P G PP G G PP G PPP
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 803 PLXGGXXPPPPPP 765
P+ GG PPPPPP
Sbjct: 584 PMLGGPPPPPPPP 596
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 800 LXGGXXPPPPPP 765
L G PPPPPP
Sbjct: 572 LSGAPPPPPPPP 583
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 782 PPPPPPXXPXEG 747
PPPPPP P G
Sbjct: 576 PPPPPPPPPMLG 587
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/98 (27%), Positives = 30/98 (30%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G PA P G RG P + P+ G PP P PQ
Sbjct: 568 GLAPARPPPPPPSSGTRGIAPSRPLPQA------PNYGTPENRPHAVPPPPP---PPPPQ 618
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
G P P P P P G +P PPPP
Sbjct: 619 SFGMAPISSAAPPPPPP-PPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/98 (27%), Positives = 30/98 (30%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G PA P G RG P + P+ G PP P PQ
Sbjct: 394 GLAPARPPPPPPSSGTRGIAPSRPLPQA------PNYGTPENRPHAVPPPPP---PPPPQ 444
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
G P P P P P G +P PPPP
Sbjct: 445 SFGMAPISSAAPPPPPP-PPPMGLPAVGAGAPPPPPPP 481
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/87 (25%), Positives = 23/87 (26%)
Frame = +1
Query: 676 PXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQXGGXPPGKKX 855
P P G G P P G P G P G PP
Sbjct: 182 PGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 241
Query: 856 XXKXPKKGPTPXXGPXXGXFSPXAPPP 936
G P GP G F+P PP
Sbjct: 242 PGPFDPSGAPPSGGP-PGPFNPSGAPP 267
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/97 (26%), Positives = 29/97 (29%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G P+ GP P G P + PS G PP G P
Sbjct: 414 GAPPSGGPPGPFNPSGAPPSGGPPGPFN-PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFN 471
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPP 936
G PP G P GP G F+P PP
Sbjct: 472 PSGAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSGAPP 507
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/97 (26%), Positives = 27/97 (27%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G P+ GP P G P PS G PP G P
Sbjct: 309 GAQPSGGPPGPFNPSGAPPSGGPPGPFD-PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFD 366
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPP 936
G PP G P GP G F P PP
Sbjct: 367 PSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSGAPP 402
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/97 (26%), Positives = 28/97 (28%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G P+ GP P G P PS G PP G P
Sbjct: 339 GAPPSGGPPGPFNPSGAPPSGGPPGPFD-PSGAPPSGGPPGPFDPSGAPPSGGP-PGPFD 396
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPP 936
G PP G P GP G F+P PP
Sbjct: 397 PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFNPSGAPP 432
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/97 (26%), Positives = 28/97 (28%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G P+ GP P G P + PS G PP G P
Sbjct: 399 GAPPSGGPPGPFNPSGAPPSGGPPGPFN-PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFN 456
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPP 936
G PP G P GP G F P PP
Sbjct: 457 PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFDPSGAPP 492
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/97 (26%), Positives = 28/97 (28%)
Frame = +1
Query: 646 GXXPALKXXGPXPPGKRGXXFGAXFPXSLXQXXXPSXGXXXXXXXXFXPPXRGEIPXXPQ 825
G P+ GP P G P + PS G PP G P
Sbjct: 429 GAPPSGGPPGPFNPSGAPPSGGPPGPFN-PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFD 486
Query: 826 XGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPP 936
G PP G P GP G F P PP
Sbjct: 487 PSGAPPSGGPPGPFNPSGAPPSGGP-PGPFDPSGAPP 522
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 811 PXXPQXGGXPPGKKXXXKXPKKGPTPXXGPXXGXFSPXAPPPP 939
P P G PP P GP P G F P PPPP
Sbjct: 707 PPPPGIPGYPPAPPP----PGVGPPPPQGIPPMGFDPNKPPPP 745
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 809 ISPLXGGXXPPPPPPXXPXE 750
+ P+ G PPPPPP P +
Sbjct: 239 LPPVGAGAPPPPPPPPPPAQ 258
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 809 ISPLXGGXXPPPPPPXXPXE 750
+ P+ G PPPPPP P +
Sbjct: 225 LPPVGAGAPPPPPPPPPPAQ 244
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 809 ISPLXGGXXPPPPPPXXPXE 750
+ P+ G PPPPPP P +
Sbjct: 225 LPPVGAGAPPPPPPPPPPAQ 244
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 23.4 bits (48), Expect(2) = 9.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 809 ISPLXGGXXPPPPPP 765
++P+ PPPPPP
Sbjct: 308 LAPMCMAPPPPPPPP 322
Score = 23.0 bits (47), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 782 PPPPPPXXP 756
PPPPPP P
Sbjct: 316 PPPPPPPLP 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,586,258
Number of Sequences: 27780
Number of extensions: 220045
Number of successful extensions: 1862
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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