Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B23
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113320-1|AAM29325.1|  110|Drosophila melanogaster AT28250p pro...    53   5e-07
AE013599-3894|AAM68318.1|  110|Drosophila melanogaster CG13585-P...    53   5e-07
AE013599-3893|AAF47223.1|  110|Drosophila melanogaster CG13585-P...    53   5e-07
AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orp...    31   1.6  

>AY113320-1|AAM29325.1|  110|Drosophila melanogaster AT28250p
           protein.
          Length = 110

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 237 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLE 353
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYD 39


>AE013599-3894|AAM68318.1|  110|Drosophila melanogaster CG13585-PB,
           isoform B protein.
          Length = 110

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 237 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLE 353
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYD 39


>AE013599-3893|AAF47223.1|  110|Drosophila melanogaster CG13585-PA,
           isoform A protein.
          Length = 110

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 237 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLE 353
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYD 39


>AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orphan
            neurotransmittertransporter protein.
          Length = 1035

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 656  VNTRRVCVVSQLCVYNTNNWNSKVATTTRDEQVASA 549
            +  +R+C+ +  C+Y T N+  ++      E V+S+
Sbjct: 997  IQNKRICICNPYCIYGTPNYKLRITNHVHTESVSSS 1032


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,075,852
Number of Sequences: 53049
Number of extensions: 717992
Number of successful extensions: 1900
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)