Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B23
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.8  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       23   5.0  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   6.6  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 355 CSRHSLSVQYDWP*RSSEIKRRMASS*FQRHSHGSISSP 239
           C R SLS +     RS    +R +SS   R S  S  SP
Sbjct: 6   CDRKSLSQRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSP 44


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 423 ICVSYVYDAPATQPDP 470
           + +SY+Y AP  +P P
Sbjct: 14  VYISYIYAAPEPEPAP 29


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 61  PSXQWKNVVAIVDNLLNIFISNYFSKRRYCSFSPKY 168
           PS +W  V     NL+N  ++   SKR   S + K+
Sbjct: 132 PSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,499
Number of Sequences: 438
Number of extensions: 4709
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)