Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_B20
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein. 169 1e-41
BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence recepto... 169 1e-41
BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence recepto... 169 1e-41
AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence recepto... 169 1e-41
AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence recepto... 169 1e-41
AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated p... 169 1e-41
AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens ... 169 2e-41
AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence recepto... 168 2e-41
Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein. 167 5e-41
>CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein.
Length = 286
Score = 169 bits (411), Expect = 1e-41
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 169 bits (411), Expect = 1e-41
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 169 bits (411), Expect = 1e-41
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 169 bits (411), Expect = 1e-41
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 169 bits (411), Expect = 1e-41
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated
protein alpha subunit protein.
Length = 286
Score = 169 bits (411), Expect = 1e-41
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens
cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
).
Length = 259
Score = 169 bits (410), Expect = 2e-41
Identities = 80/154 (51%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Frame = +1
Query: 280 LVDDDESVVKSS-QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVES 456
L +D+E+V S +D D + P+ DL D A V+F VGF NKG+ D++VES
Sbjct: 35 LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92
Query: 457 MEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRD 636
++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D
Sbjct: 93 LDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKD 152
Query: 637 ASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 153 LNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 186
>AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 168 bits (409), Expect = 2e-41
Identities = 80/151 (52%), Positives = 106/151 (70%)
Frame = +1
Query: 286 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 465
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 466 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 645
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 646 NAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
N +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein.
Length = 286
Score = 167 bits (406), Expect = 5e-41
Identities = 80/156 (51%), Positives = 108/156 (69%)
Frame = +1
Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 450
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 451 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 630
ES++ASFRYP D+ +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDHQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 631 RDASGNAYQEAVYNQTLNIVEVSEGLDGETSXLYVF 738
+D +GN +Q+AV+NQT+ ++E +GLDGET +Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,025,656
Number of Sequences: 237096
Number of extensions: 2464016
Number of successful extensions: 5389
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5382
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -