SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B19
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   7.4  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   7.4  
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq...    31   7.4  
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio...    31   7.4  
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.             31   7.4  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -1

Query: 661 SEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 491
           S+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 582 SKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -1

Query: 661 SEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 491
           S+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 583 SKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA
           sequence from clone RP4-669P10 on chromosome
           22q13.31-13.33.  ).
          Length = 1960

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = -2

Query: 792 GVXAHSPAWSERPTPN*DTYSVSYEKAPRFPKGEGGQVSGKRQGRNRRAHEGASRGK 622
           G     PA ++RP  N      S+   P+     GG   G + G N   H G   G+
Sbjct: 626 GSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNHNGEGNGQ 682


>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
           factor 20 (AR1, KIAA0292)) protein.
          Length = 1641

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = -2

Query: 792 GVXAHSPAWSERPTPN*DTYSVSYEKAPRFPKGEGGQVSGKRQGRNRRAHEGASRGK 622
           G     PA ++RP  N      S+   P+     GG   G + G N   H G   G+
Sbjct: 382 GSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNHNGEGNGQ 438


>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
          Length = 1716

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = -2

Query: 792 GVXAHSPAWSERPTPN*DTYSVSYEKAPRFPKGEGGQVSGKRQGRNRRAHEGASRGK 622
           G     PA ++RP  N      S+   P+     GG   G + G N   H G   G+
Sbjct: 382 GSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNHNGEGNGQ 438


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,392,930
Number of Sequences: 237096
Number of extensions: 2754950
Number of successful extensions: 8252
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8250
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -