Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B14
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       33   0.23 
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694...    29   4.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
01_01_1008 - 7987936-7988628,7988923-7989102                           29   6.5  
12_02_1188 + 26801833-26802225                                         28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
04_03_0380 - 15150814-15152304                                         28   8.6  
04_03_0348 + 14735581-14737071                                         28   8.6  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +3

Query: 531 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAYRIPVPP 686
           L PP          Q+WR+  PTG   + +FP G LP A     PA  R P  P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATP 66


>01_02_0036 +
           10468636-10468938,10469014-10469109,10469247-10469453,
           10470762-10471097,10471469-10471582,10471634-10471639
          Length = 353

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 712 KRHASRREKGGTGIR*AAGSEQESARGSXPGGNAW 608
           K H  RR +GG G       E+E+ R S  GG  W
Sbjct: 9   KHHHHRRRRGGGGEDGGEEEEEETGRLSLRGGGFW 43


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 343 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 498
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 714 ESATLPEGRKAG--QVSGKRQGRNRRAHEGAXQGETPG 607
           E+     GR+ G  +V+G+   R+RR   GA +GE  G
Sbjct: 237 EARVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>12_02_1188 + 26801833-26802225
          Length = 130

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 693 GRKAGQVSGKRQGRNRRAHEGAXQGETPGIFIVLSG 586
           G   G  SGKR      AHEG  +G  P +++V  G
Sbjct: 30  GGGGGGSSGKRSSSAAAAHEGVPEGHVP-VYVVGEG 64


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 292 NESAN---ARGEAVCVLGALPLPRSLTRCAR 375
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 709 RHASRREKGGTGIR*AAGSEQESARGSXPGGNA 611
           R A   EKG    R AAG ++ +AR + PGG A
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 709 RHASRREKGGTGIR*AAGSEQESARGSXPGGNA 611
           R A   EKG    R AAG ++ +AR + PGG A
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGGPA 472


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,655,261
Number of Sequences: 37544
Number of extensions: 524937
Number of successful extensions: 1446
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)