Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B11
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-6|CAB00120.1|  451|Caenorhabditis elegans Hypothetical pr...   283   9e-77
Z82264-5|CAB05156.1|  404|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z92786-7|CAB07209.1|  145|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AF440508-1|AAL34096.1|  144|Caenorhabditis elegans SKR-5 protein.      29   6.1  

>Z75955-6|CAB00120.1|  451|Caenorhabditis elegans Hypothetical
           protein R07B7.11 protein.
          Length = 451

 Score =  283 bits (695), Expect = 9e-77
 Identities = 124/236 (52%), Positives = 157/236 (66%)
 Frame = +3

Query: 135 IRLILVFLTISHSYALNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLM 314
           +RL+L  L    ++ L+NGL  TPPMGW++W  F C  DC K+P  CI+E L K  AD +
Sbjct: 1   MRLLLPLLFCVGAFCLDNGLGRTPPMGWMSWTAFYCEIDCVKHPTGCINEQLYKDMADQL 60

Query: 315 VSEGYLDAGYEYLGIDDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYED 494
           VS GY   GY+ + IDDCW E  RD  G LV ++ RFP+GMKA+A Y+H +GLKFG+YED
Sbjct: 61  VSGGYDKVGYKSVHIDDCWSEMERDSHGILVANKTRFPSGMKALAKYMHDRGLKFGIYED 120

Query: 495 YGNLTCAGYPGVLGNEKIDINTFVEWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRS 674
           YG  TC GYPG   +EK+D  TF  W++DYLKLDGC ID   M  GYP F K LN TGR 
Sbjct: 121 YGTKTCGGYPGSYKHEKVDAQTFAAWDVDYLKLDGCNIDQAMMPIGYPLFEKELNETGRP 180

Query: 675 ILYSCSWPAYQEEKKILPNYASIAEHCNLWRNYDDXEDSWASLTKIMXWFGDNQDR 842
           I+YSCSWPAY  +   L NY  I ++CN WRN+DD   SW S+  I+ ++   QD+
Sbjct: 181 IMYSCSWPAYLIDHPELVNYNLIGKYCNTWRNFDDINSSWKSIISIISYYDKMQDK 236


>Z82264-5|CAB05156.1|  404|Caenorhabditis elegans Hypothetical
           protein C49C3.11 protein.
          Length = 404

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 830 VTKPXHDLRKRCPRVFXIIIIAPKVTVLCYRC-IVWQYLFFLLI 702
           VTK    +RK   R F       K T LC RC IVW+ L+ L+I
Sbjct: 38  VTKKKKKVRKCVKRGFICCFKFCKYTFLCCRCVIVWRCLWLLII 81


>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
            B0416.1 protein.
          Length = 1203

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 375  EKTRDDKGRLVPDRKRFPNGMKAI 446
            E T D+KGRL+PDR   P+  + +
Sbjct: 1114 ETTDDEKGRLIPDRPPIPHSPREL 1137


>Z92786-7|CAB07209.1|  145|Caenorhabditis elegans Hypothetical
           protein F47H4.10 protein.
          Length = 145

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +3

Query: 567 EWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYSCSWPAYQEEKKI 722
           EW++++LK+D   +  + +   Y D   L N T +SI  S    + +E + +
Sbjct: 84  EWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAV 135


>AF440508-1|AAL34096.1|  144|Caenorhabditis elegans SKR-5 protein.
          Length = 144

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +3

Query: 567 EWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYSCSWPAYQEEKKI 722
           EW++++LK+D   +  + +   Y D   L N T +SI  S    + +E + +
Sbjct: 83  EWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAV 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,249,521
Number of Sequences: 27780
Number of extensions: 486647
Number of successful extensions: 1201
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)