Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_B10
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 286 1e-77
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 29 4.5
AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein. 29 5.9
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 29 5.9
AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical ... 29 5.9
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 29 5.9
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 29 5.9
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 29 5.9
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 29 5.9
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 286 bits (702), Expect = 1e-77
Identities = 128/188 (68%), Positives = 160/188 (85%)
Frame = +1
Query: 136 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 315
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 316 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 495
+RKA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 496 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 675
V +P NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML +
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGV 180
Query: 676 SPFSYGLV 699
+PFSYGLV
Sbjct: 181 TPFSYGLV 188
Score = 85.4 bits (202), Expect = 5e-17
Identities = 36/66 (54%), Positives = 50/66 (75%)
Frame = +2
Query: 695 LFVKQVYDSGTIFAPEILDIKPENLRAKFQAGVANVXALSLAIGYPTIASAPHSIANGFX 874
L V+QVYD GT++ PE+LD+ E LR +F +GV NV ++SLA+ YPT+AS HS+ANG
Sbjct: 187 LVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQ 246
Query: 875 NLLAIA 892
N+L +A
Sbjct: 247 NMLGVA 252
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 63.7 bits (148), Expect = 2e-10
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 3/200 (1%)
Frame = +1
Query: 109 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 288
R +L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 289 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 462
GKN ++ A+ + A L K +KG G +FT EV + E +
Sbjct: 65 RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEED 124
Query: 463 PARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 639
AR G +A +VV+P + + L +PTK+ KG I + + K G+ +
Sbjct: 125 YARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLT 184
Query: 640 ASEATLLNMLNISPFSYGLV 699
+A +L + + L+
Sbjct: 185 VEQAKILKHFEVKMSQFRLI 204
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/56 (23%), Positives = 21/56 (37%)
Frame = +2
Query: 284 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 451
P C+ + C T ++P+ C H + T CSP + C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162
>AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 190 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 226
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 354 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 390
>AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical
protein Y15E3A.1b protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 190 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 226
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 354 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 390
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 356 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 392
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 355 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 391
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 798 LATPAWNLARRFSGLMSRISGAKIVPESYTCLTNKTI 688
+A A L RF+ L+ S K+ PE+Y C+ T+
Sbjct: 355 VAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITL 391
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 91 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 204
L+ K S ++ +SR+ +EDK + SN+++K QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 500 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 390
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,397,937
Number of Sequences: 27780
Number of extensions: 472655
Number of successful extensions: 1379
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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