Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B07
         (955 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    68   1e-11
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     68   1e-11
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    68   1e-11
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   5.5  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    29   7.2  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 29/39 (74%), Positives = 29/39 (74%)
 Frame = +1

Query: 175 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGF 291
           YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF
Sbjct: 14  YGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGF 52


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 29/39 (74%), Positives = 29/39 (74%)
 Frame = +1

Query: 175 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGF 291
           YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF
Sbjct: 14  YGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGF 52


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 29/39 (74%), Positives = 29/39 (74%)
 Frame = +1

Query: 175 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGF 291
           YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF
Sbjct: 14  YGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGF 52


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 19/70 (27%), Positives = 19/70 (27%)
 Frame = -2

Query: 879  PPXXXXXPQTXPXGGXXKTPLXPPXETXXXGXXXXXEKXGXXPKXRXAPSPXGGGGVXFX 700
            P      P   P GG    P  PP      G        G  P         G GG    
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTP 1201

Query: 699  RXANPPPXPP 670
              A  PP PP
Sbjct: 1202 PGAPAPPMPP 1211


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 753 PKXRXAPSPXGGGGVXFXRXANPPPXPPL 667
           P+    P   GGGG  F R   PPP PP+
Sbjct: 15  PQHPPPPQAGGGGGGEFYR--GPPPQPPM 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,749,312
Number of Sequences: 37544
Number of extensions: 349925
Number of successful extensions: 1035
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)