Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_B01
(896 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0027 - 25029725-25030017,25030097-25030211,25030347-250305... 180 2e-45
01_06_0874 + 32646039-32646269,32646351-32646450,32647400-326474... 178 4e-45
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114... 97 2e-20
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 71 1e-12
01_07_0240 - 42227132-42227245,42227332-42227394,42227484-422275... 54 2e-07
02_05_0493 + 29484285-29484467,29484757-29484900,29485014-294850... 36 0.044
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045 30 2.9
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 30 2.9
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 30 2.9
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 29 5.0
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704... 28 8.8
09_04_0246 - 16024454-16024529,16024635-16024720,16024805-160248... 28 8.8
>05_06_0027 -
25029725-25030017,25030097-25030211,25030347-25030504,
25030582-25030682,25030846-25030994,25031089-25031239,
25031329-25031482,25032249-25032321,25032446-25032676
Length = 474
Score = 180 bits (437), Expect = 2e-45
Identities = 87/139 (62%), Positives = 105/139 (75%)
Frame = +1
Query: 376 GKPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIP 555
GKP+ G SGKTTTCTK A+++ K +K LVCADTFRAGA+DQ+KQN TKA+IP
Sbjct: 90 GKPSFTPTKGKPSSGKTTTCTKYAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIP 149
Query: 556 FYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEMLAVATAIKPDNII 735
+YGSY E DPV IA GV+ F+K+ ++IIVDTSGRHKQE +LFEEM VA A KPD +I
Sbjct: 150 YYGSYMESDPVKIAVEGVERFRKEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVI 209
Query: 736 FVMDATIGQACEAQARASK 792
FVMD +IGQA QA+A K
Sbjct: 210 FVMDGSIGQAAFDQAQAFK 228
Score = 48.4 bits (110), Expect = 8e-06
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 222 LXKNLRENVRAVIDFDEMAGGLNKRRMIQSAVFKELVKLVDPG 350
+ ++R N+R ++ D + G NKRR+IQ AVF EL ++DPG
Sbjct: 48 MVSDMRANIRRAVNLDALPAGTNKRRIIQQAVFAELCNMLDPG 90
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 777 SQGFKDKVDIGSVIITKLDGHXXXXXXXXXXXXTQSPIIF 896
+Q FK +G+VI+TKLDGH T+SP++F
Sbjct: 224 AQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVVF 263
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 98 GRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNI 217
G I+ AL +S AT+I+++ L +I ALL++DV I
Sbjct: 7 GGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQI 46
>01_06_0874 +
32646039-32646269,32646351-32646450,32647400-32647461,
32647503-32647609,32647689-32647839,32647925-32648073,
32648557-32648657,32648730-32648887,32648968-32649015,
32649028-32649142,32649212-32649543
Length = 517
Score = 178 bits (434), Expect = 4e-45
Identities = 91/154 (59%), Positives = 110/154 (71%), Gaps = 5/154 (3%)
Frame = +1
Query: 346 PGFKPYQPVKGKPNVIMFVGLQGS-----GKTTTCTKLAYHYLRKNWKSCLVCADTFRAG 510
PG + P KGKP V+MFVGLQ S + ++ LRK +K LVCADTFRAG
Sbjct: 89 PGKPSFTPKKGKPCVVMFVGLQDSLIELQYSIPMTSTVSMQVLRKGFKPALVCADTFRAG 148
Query: 511 AYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFE 690
A+DQ+KQN TKA+IPFYGSY E DPV IA GV+ FKK+ ++IIVDTSGRHKQE +LFE
Sbjct: 149 AFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFE 208
Query: 691 EMLAVATAIKPDNIIFVMDATIGQACEAQARASK 792
EM V+ A KPD +IFVMD++IGQA QA+A K
Sbjct: 209 EMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFK 242
Score = 48.4 bits (110), Expect = 8e-06
Identities = 17/43 (39%), Positives = 32/43 (74%)
Frame = +3
Query: 222 LXKNLRENVRAVIDFDEMAGGLNKRRMIQSAVFKELVKLVDPG 350
+ ++++ N++ +++ + +A G NKRR+IQ AVF EL ++DPG
Sbjct: 48 MVRDMQSNIKRIVNLETLAAGTNKRRIIQQAVFTELCNMLDPG 90
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 777 SQGFKDKVDIGSVIITKLDGHXXXXXXXXXXXXTQSPIIF 896
+Q FK V +G+VI+TK+DGH T+SP+IF
Sbjct: 238 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIF 277
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 98 GRKITTALQSLSRATIINEEVLNSMLKQICAALLEADV 211
G I+ AL +S AT+I+E+VL+ L +I ALL++DV
Sbjct: 7 GGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDV 44
>08_02_1023 - 23710825-23710950,23711037-23711120,23711367-23711492,
23711593-23711712,23712046-23712153,23712243-23712395,
23712505-23712600,23712716-23712800,23713278-23714268,
23714870-23714915,23715806-23715964,23716516-23716651,
23716734-23716900,23717366-23717696,23717827-23718062,
23718326-23718514
Length = 1050
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/129 (34%), Positives = 74/129 (57%)
Frame = +1
Query: 373 KGKPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARI 552
+GKP VI+FVG+ G GK+T K+AY L+ N L DTFR+GA +Q++ + + +I
Sbjct: 841 RGKPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVSLAACDTFRSGAVEQLRTHARRLQI 900
Query: 553 PFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEMLAVATAIKPDNI 732
P + E DP V+A + + ++++VDT+GR + E L + + PD +
Sbjct: 901 PIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLV 960
Query: 733 IFVMDATIG 759
+FV +A +G
Sbjct: 961 LFVGEALVG 969
>11_01_0334 +
2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 457 LRKNWKSC-LVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGF 633
LR KSC L+ AD +R A DQ+ + +P Y TE P IA G+ K +
Sbjct: 608 LRLQGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKT 667
Query: 634 EMIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACEAQARASK 792
++IIVDT+GR + ++++ E+ V A+ P ++ V+DA GQ R ++
Sbjct: 668 DVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAAFALRLTR 720
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = +1
Query: 493 DTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQ 672
D +R A DQ+ + +P Y TE P I V+ K++ + I++DT+GR +
Sbjct: 197 DVYRPAAIDQLTILGEQVGVPVYSEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQI 256
Query: 673 EESLFEEMLAVATAIKPDNIIFVMDATIGQACEA 774
++S+ E+ V A+ P ++ V+DA GQ A
Sbjct: 257 DKSMMVELKEVKKAVNPTEVLLVVDAMTGQEAAA 290
>01_07_0240 -
42227132-42227245,42227332-42227394,42227484-42227552,
42227716-42227798,42228056-42228176,42228335-42228372,
42228932-42228990,42229076-42229149,42229241-42229753
Length = 377
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVK 528
KP VIM VG+ G GKTT+ KLAY + + K + DTFRA A DQ++
Sbjct: 197 KPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAARDQLE 246
>02_05_0493 +
29484285-29484467,29484757-29484900,29485014-29485088,
29485167-29485354,29485441-29485606,29485698-29486099,
29486210-29486341
Length = 429
Score = 35.9 bits (79), Expect = 0.044
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 382 PNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLV 486
P ++ F+G GSGKTT A +Y + K+CLV
Sbjct: 39 PKLVTFLGKGGSGKTTAAAVAAQYYASEGLKTCLV 73
>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
Length = 1294
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 388 VIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVC-ADTF 501
++ +G G GKTT ++ +RKN+K VC +D F
Sbjct: 241 ILSLIGHGGMGKTTLAQRVCEEMVRKNFKVIWVCVSDRF 279
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCA 492
KP + + G G+GKT T + YH ++ LVCA
Sbjct: 527 KP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 563
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLA 447
+PNV++ G G+GKTTTC+ LA
Sbjct: 12 RPNVLV-TGTPGTGKTTTCSLLA 33
>01_07_0111 -
41137822-41138973,41139453-41139540,41139850-41139969,
41140165-41140211,41140796-41141029,41141305-41141505,
41141506-41143407,41144140-41145303,41145574-41145879
Length = 1737
Score = 29.1 bits (62), Expect = 5.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 442 LAYHYLRKNWKSCLVCADTFRAG 510
L+Y+Y++ N+K C C +F G
Sbjct: 424 LSYYYMKPNYKMCFTCLASFSKG 446
>11_01_0800 -
7047425-7048253,7048340-7048927,7049050-7049268,
7049398-7049518,7050593-7050983
Length = 715
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 311 CGFQRTSQACRSRGLNHTSPSKGSLM**CLWDYKDLERPQHVQNLHIITY 460
CGF Q R NH S+ WDY LE P+H+ LH I +
Sbjct: 161 CGFMVALQETRCPSCNHVGLSRDDPED---WDYVQLESPRHL--LHGIVH 205
>09_04_0246 -
16024454-16024529,16024635-16024720,16024805-16024894,
16025349-16025435,16026112-16026229,16026852-16026982,
16027619-16027909,16028000-16028124,16028209-16028334,
16028452-16028487,16028599-16028902
Length = 489
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +1
Query: 382 PNVIMFVGLQGSGKTTTCTKLAYHYLRKN--WKSCLVCADTFRAGAYDQVKQNCTKARIP 555
P V+ F L+GS KTT K LRK C + R ++ N K R
Sbjct: 17 PEVMTFYNLRGSDKTTILRKKELQRLRKERIENKCFRKKEKIRKA--KEIVDNALKIREE 74
Query: 556 FYGSYTEVDP 585
+ Y +P
Sbjct: 75 LHQKYLRAEP 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,241,211
Number of Sequences: 37544
Number of extensions: 413918
Number of successful extensions: 1127
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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