Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_B01
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86373-1|CAA60132.1| 504|Homo sapiens SRP 54 protein. 259 1e-68
U51920-1|AAC50994.1| 504|Homo sapiens signal recognition partic... 259 1e-68
BC003389-1|AAH03389.1| 504|Homo sapiens signal recognition part... 259 1e-68
BC000652-1|AAH00652.1| 504|Homo sapiens signal recognition part... 259 1e-68
X06272-1|CAA29608.1| 638|Homo sapiens protein ( Human mRNA for ... 69 2e-11
CR457025-1|CAG33306.1| 638|Homo sapiens SRPR protein. 69 2e-11
BC013583-1|AAH13583.1| 638|Homo sapiens signal recognition part... 69 2e-11
BC009110-1|AAH09110.1| 638|Homo sapiens signal recognition part... 69 2e-11
BC001162-1|AAH01162.1| 638|Homo sapiens signal recognition part... 69 2e-11
BC022031-1|AAH22031.1| 421|Homo sapiens chromosome 6 open readi... 33 1.4
AL133472-2|CAI19668.1| 421|Homo sapiens RP1-70A9.1 protein. 33 1.4
AL133472-1|CAI19667.1| 751|Homo sapiens RP1-70A9.1 protein. 33 1.4
AL121788-2|CAI22499.1| 421|Homo sapiens RP1-70A9.1 protein. 33 1.4
AL121788-1|CAI22498.1| 751|Homo sapiens RP1-70A9.1 protein. 33 1.4
AK055538-1|BAB70945.1| 421|Homo sapiens protein ( Homo sapiens ... 33 1.4
>X86373-1|CAA60132.1| 504|Homo sapiens SRP 54 protein.
Length = 504
Score = 259 bits (634), Expect = 1e-68
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +1
Query: 346 PGFKPYQPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQV 525
PG K + P KGK NVIMFVGLQGSGKTTTC+KLAY+Y RK WK+CL+CADTFRAGA+DQ+
Sbjct: 89 PGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQL 148
Query: 526 KQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEMLAV 705
KQN TKARIPFYGSYTE+DPV+IA+ GV+ FK + FE+IIVDTSGRHKQE+SLFEEML V
Sbjct: 149 KQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQV 208
Query: 706 ATAIKPDNIIFVMDATIGQACEAQARASKTK 798
A AI+PDNI++VMDA+IGQACEAQA+A K K
Sbjct: 209 ANAIQPDNIVYVMDASIGQACEAQAKAFKDK 239
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +3
Query: 222 LXKNLRENVRAVIDFDEMAGGLNKRRMIQSAVFKELVKLVDPGV 353
L K LRENV++ ID +EMA GLNKR+MIQ AVFKELVKLVDPGV
Sbjct: 48 LVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 91
Score = 70.1 bits (164), Expect = 1e-11
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +2
Query: 98 GRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNI 217
GRKIT+AL+SLS ATIINEEVLN+MLK++C ALLEADVNI
Sbjct: 7 GRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNI 46
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 771 SSSQGFKDKVDIGSVIITKLDGHXXXXXXXXXXXXTQSPIIF 896
+ ++ FKDKVD+ SVI+TKLDGH T+SPIIF
Sbjct: 231 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIF 272
>U51920-1|AAC50994.1| 504|Homo sapiens signal recognition particle
protein.
Length = 504
Score = 259 bits (634), Expect = 1e-68
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +1
Query: 346 PGFKPYQPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQV 525
PG K + P KGK NVIMFVGLQGSGKTTTC+KLAY+Y RK WK+CL+CADTFRAGA+DQ+
Sbjct: 89 PGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQL 148
Query: 526 KQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEMLAV 705
KQN TKARIPFYGSYTE+DPV+IA+ GV+ FK + FE+IIVDTSGRHKQE+SLFEEML V
Sbjct: 149 KQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQV 208
Query: 706 ATAIKPDNIIFVMDATIGQACEAQARASKTK 798
A AI+PDNI++VMDA+IGQACEAQA+A K K
Sbjct: 209 ANAIQPDNIVYVMDASIGQACEAQAKAFKDK 239
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +3
Query: 222 LXKNLRENVRAVIDFDEMAGGLNKRRMIQSAVFKELVKLVDPGV 353
L K LRENV++ ID +EMA GLNKR+MIQ AVFKELVKLVDPGV
Sbjct: 48 LVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 91
Score = 70.1 bits (164), Expect = 1e-11
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +2
Query: 98 GRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNI 217
GRKIT+AL+SLS ATIINEEVLN+MLK++C ALLEADVNI
Sbjct: 7 GRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNI 46
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 771 SSSQGFKDKVDIGSVIITKLDGHXXXXXXXXXXXXTQSPIIF 896
+ ++ FKDKVD+ SVI+TKLDGH T+SPIIF
Sbjct: 231 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIF 272
>BC003389-1|AAH03389.1| 504|Homo sapiens signal recognition
particle 54kDa protein.
Length = 504
Score = 259 bits (634), Expect = 1e-68
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +1
Query: 346 PGFKPYQPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQV 525
PG K + P KGK NVIMFVGLQGSGKTTTC+KLAY+Y RK WK+CL+CADTFRAGA+DQ+
Sbjct: 89 PGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQL 148
Query: 526 KQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEMLAV 705
KQN TKARIPFYGSYTE+DPV+IA+ GV+ FK + FE+IIVDTSGRHKQE+SLFEEML V
Sbjct: 149 KQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQV 208
Query: 706 ATAIKPDNIIFVMDATIGQACEAQARASKTK 798
A AI+PDNI++VMDA+IGQACEAQA+A K K
Sbjct: 209 ANAIQPDNIVYVMDASIGQACEAQAKAFKDK 239
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +3
Query: 222 LXKNLRENVRAVIDFDEMAGGLNKRRMIQSAVFKELVKLVDPGV 353
L K LRENV++ ID +EMA GLNKR+MIQ AVFKELVKLVDPGV
Sbjct: 48 LVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 91
Score = 70.1 bits (164), Expect = 1e-11
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +2
Query: 98 GRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNI 217
GRKIT+AL+SLS ATIINEEVLN+MLK++C ALLEADVNI
Sbjct: 7 GRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNI 46
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 771 SSSQGFKDKVDIGSVIITKLDGHXXXXXXXXXXXXTQSPIIF 896
+ ++ FKDKVD+ SVI+TKLDGH T+SPIIF
Sbjct: 231 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIF 272
>BC000652-1|AAH00652.1| 504|Homo sapiens signal recognition
particle 54kDa protein.
Length = 504
Score = 259 bits (634), Expect = 1e-68
Identities = 116/151 (76%), Positives = 135/151 (89%)
Frame = +1
Query: 346 PGFKPYQPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQV 525
PG K + P KGK NVIMFVGLQGSGKTTTC+KLAY+Y RK WK+CL+CADTFRAGA+DQ+
Sbjct: 89 PGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQL 148
Query: 526 KQNCTKARIPFYGSYTEVDPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEMLAV 705
KQN TKARIPFYGSYTE+DPV+IA+ GV+ FK + FE+IIVDTSGRHKQE+SLFEEML V
Sbjct: 149 KQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQV 208
Query: 706 ATAIKPDNIIFVMDATIGQACEAQARASKTK 798
A AI+PDNI++VMDA+IGQACEAQA+A K K
Sbjct: 209 ANAIQPDNIVYVMDASIGQACEAQAKAFKDK 239
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +3
Query: 222 LXKNLRENVRAVIDFDEMAGGLNKRRMIQSAVFKELVKLVDPGV 353
L K LRENV++ ID +EMA GLNKR+MIQ AVFKELVKLVDPGV
Sbjct: 48 LVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 91
Score = 70.1 bits (164), Expect = 1e-11
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +2
Query: 98 GRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNI 217
GRKIT+AL+SLS ATIINEEVLN+MLK++C ALLEADVNI
Sbjct: 7 GRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNI 46
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 771 SSSQGFKDKVDIGSVIITKLDGHXXXXXXXXXXXXTQSPIIF 896
+ ++ FKDKVD+ SVI+TKLDGH T+SPIIF
Sbjct: 231 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIF 272
>X06272-1|CAA29608.1| 638|Homo sapiens protein ( Human mRNA for
docking protein (signal recognition particle receptor).
).
Length = 638
Score = 69.3 bits (162), Expect = 2e-11
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTK--ARI 552
+P V+ F G+ G GK+T K+++ L + + DTFRAGA +Q++ + + A
Sbjct: 417 RPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALH 476
Query: 553 P--FYGSYTEV---------DPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEML 699
P +G T V D IA + + QGF++++VDT+GR + L +
Sbjct: 477 PPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALA 536
Query: 700 AVATAIKPDNIIFVMDATIG 759
+ T PD ++FV +A +G
Sbjct: 537 KLITVNTPDLVLFVGEALVG 556
>CR457025-1|CAG33306.1| 638|Homo sapiens SRPR protein.
Length = 638
Score = 69.3 bits (162), Expect = 2e-11
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTK--ARI 552
+P V+ F G+ G GK+T K+++ L + + DTFRAGA +Q++ + + A
Sbjct: 417 RPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALH 476
Query: 553 P--FYGSYTEV---------DPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEML 699
P +G T V D IA + + QGF++++VDT+GR + L +
Sbjct: 477 PPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALA 536
Query: 700 AVATAIKPDNIIFVMDATIG 759
+ T PD ++FV +A +G
Sbjct: 537 KLITVNTPDLVLFVGEALVG 556
>BC013583-1|AAH13583.1| 638|Homo sapiens signal recognition
particle receptor ('docking protein') protein.
Length = 638
Score = 69.3 bits (162), Expect = 2e-11
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTK--ARI 552
+P V+ F G+ G GK+T K+++ L + + DTFRAGA +Q++ + + A
Sbjct: 417 RPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALH 476
Query: 553 P--FYGSYTEV---------DPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEML 699
P +G T V D IA + + QGF++++VDT+GR + L +
Sbjct: 477 PPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALA 536
Query: 700 AVATAIKPDNIIFVMDATIG 759
+ T PD ++FV +A +G
Sbjct: 537 KLITVNTPDLVLFVGEALVG 556
>BC009110-1|AAH09110.1| 638|Homo sapiens signal recognition
particle receptor ('docking protein') protein.
Length = 638
Score = 69.3 bits (162), Expect = 2e-11
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTK--ARI 552
+P V+ F G+ G GK+T K+++ L + + DTFRAGA +Q++ + + A
Sbjct: 417 RPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALH 476
Query: 553 P--FYGSYTEV---------DPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEML 699
P +G T V D IA + + QGF++++VDT+GR + L +
Sbjct: 477 PPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALA 536
Query: 700 AVATAIKPDNIIFVMDATIG 759
+ T PD ++FV +A +G
Sbjct: 537 KLITVNTPDLVLFVGEALVG 556
>BC001162-1|AAH01162.1| 638|Homo sapiens signal recognition
particle receptor ('docking protein') protein.
Length = 638
Score = 69.3 bits (162), Expect = 2e-11
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +1
Query: 379 KPNVIMFVGLQGSGKTTTCTKLAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTK--ARI 552
+P V+ F G+ G GK+T K+++ L + + DTFRAGA +Q++ + + A
Sbjct: 417 RPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALH 476
Query: 553 P--FYGSYTEV---------DPVVIATTGVDMFKKQGFEMIIVDTSGRHKQEESLFEEML 699
P +G T V D IA + + QGF++++VDT+GR + L +
Sbjct: 477 PPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALA 536
Query: 700 AVATAIKPDNIIFVMDATIG 759
+ T PD ++FV +A +G
Sbjct: 537 KLITVNTPDLVLFVGEALVG 556
>BC022031-1|AAH22031.1| 421|Homo sapiens chromosome 6 open reading
frame 199 protein.
Length = 421
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 355 KPY--QPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRK 465
+PY P+ G P + +G Q SGKTT C LA +Y K
Sbjct: 380 RPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGK 418
>AL133472-2|CAI19668.1| 421|Homo sapiens RP1-70A9.1 protein.
Length = 421
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 355 KPY--QPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRK 465
+PY P+ G P + +G Q SGKTT C LA +Y K
Sbjct: 380 RPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGK 418
>AL133472-1|CAI19667.1| 751|Homo sapiens RP1-70A9.1 protein.
Length = 751
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 355 KPY--QPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRK 465
+PY P+ G P + +G Q SGKTT C LA +Y K
Sbjct: 380 RPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGK 418
>AL121788-2|CAI22499.1| 421|Homo sapiens RP1-70A9.1 protein.
Length = 421
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 355 KPY--QPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRK 465
+PY P+ G P + +G Q SGKTT C LA +Y K
Sbjct: 380 RPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGK 418
>AL121788-1|CAI22498.1| 751|Homo sapiens RP1-70A9.1 protein.
Length = 751
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 355 KPY--QPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRK 465
+PY P+ G P + +G Q SGKTT C LA +Y K
Sbjct: 380 RPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGK 418
>AK055538-1|BAB70945.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ30976 fis, clone HHDPC2000055, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 421
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 355 KPY--QPVKGKPNVIMFVGLQGSGKTTTCTKLAYHYLRK 465
+PY P+ G P + +G Q SGKTT C LA +Y K
Sbjct: 380 RPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGK 418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,422,056
Number of Sequences: 237096
Number of extensions: 2373790
Number of successful extensions: 8386
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8375
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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