Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_B01
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    27   0.31 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   2.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   2.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   2.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   2.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.8  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   6.6  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 299 PSLIKSTSHFIKINDSANIFS*VFXQGGYLHL 204
           PSLI +  H+ K    + I S +  + GY H+
Sbjct: 47  PSLIGANEHYSKFFPVSEILSFLIEESGYFHI 78


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 717 NSCSNCQHLFKKRLFLLMTTTSIHNNHFKTLLLEHIHSSC 598
           + C   Q L K  L    TTTS   +   T++  H++S+C
Sbjct: 310 SQCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNHLNSTC 349


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 768 TSLTNCCIHHKNYVVWFNSCSNCQHLFKKRLF 673
           +SL+N  IH+ NY   +N+ +   + + K+L+
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 768 TSLTNCCIHHKNYVVWFNSCSNCQHLFKKRLF 673
           +SL+N  IH+ NY   +N+ +   + + K+L+
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 KDLERPQHVQNLHIITYVRIGNH 478
           K L  PQH+  +H     ++GNH
Sbjct: 502 KTLPLPQHLPRIHHDAEWKVGNH 524


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 KDLERPQHVQNLHIITYVRIGNH 478
           K L  PQH+  +H     ++GNH
Sbjct: 417 KTLPLPQHLPRIHHDAEWKVGNH 439


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 KDLERPQHVQNLHIITYVRIGNH 478
           K L  PQH+  +H     ++GNH
Sbjct: 736 KTLPLPQHLPRIHHDAEWKVGNH 758


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 399 CGITRIWKDHNM 434
           C +T+IW DH++
Sbjct: 56  CWVTQIWTDHHL 67


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 690 RDVGSCYSY*TRQHNFCDGCN 752
           RD  SC+   T+ HNF   C+
Sbjct: 116 RDSLSCWLQMTKHHNFIKVCS 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,705
Number of Sequences: 438
Number of extensions: 4427
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)