Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_A18
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   5.0  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   6.6  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   6.6  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +1

Query: 52  RILSIPVYLCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHA 186
           ++L +PV   G++     D     D+YC +        +  K HA
Sbjct: 136 KVLLLPVRGAGKSNITMYDLKSHNDIYCEKYEKNGETYLRIKKHA 180


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 800 SGISSLKGGNTGFHXIRG 853
           SG  S K    GFH +RG
Sbjct: 247 SGSESFKRARMGFHGMRG 264


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 800 SGISSLKGGNTGFHXIRG 853
           SG  S K    GFH +RG
Sbjct: 247 SGSESFKRARMGFHGMRG 264


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,506
Number of Sequences: 438
Number of extensions: 3370
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)