Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_P24
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 409 PPXKXXPPXKNPXGGXPXKXGGPXKKKXPGG 501
PP PP P GG P GGP PGG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +3
Query: 321 GGXXPPXXXXXXXXXXXXXPXGGGXIXKKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXG 500
GG PP P GG P PP PP G P GGP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 501 G 503
G
Sbjct: 767 G 767
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 322 GGXXPXXXXXXXXXXXXXXPXGGGXXKKXPPXKXXPPXKNPXGGXPXKXGGPXKKKXPGG 501
GG P P GG PP PP P GG P GGP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 409 PPXKXXPPXKNPXGGXPXKXGGPXKKKXPGG 501
PP PP P GG P GGP PGG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +3
Query: 321 GGXXPPXXXXXXXXXXXXXPXGGGXIXKKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXG 500
GG PP P GG P PP PP G P GGP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 501 G 503
G
Sbjct: 767 G 767
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 322 GGXXPXXXXXXXXXXXXXXPXGGGXXKKXPPXKXXPPXKNPXGGXPXKXGGPXKKKXPGG 501
GG P P GG PP PP P GG P GGP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 409 PPXKXXPPXKNPXGGXPXKXGGPXKKKXPGG 501
PP PP P GG P GGP PGG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +3
Query: 321 GGXXPPXXXXXXXXXXXXXPXGGGXIXKKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXG 500
GG PP P GG P PP PP G P GGP P G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 501 G 503
G
Sbjct: 350 G 350
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 322 GGXXPXXXXXXXXXXXXXXPXGGGXXKKXPPXKXXPPXKNPXGGXPXKXGGPXKKKXPGG 501
GG P P GG PP PP P GG P GGP P G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 388 GGXXKKXPPXKXXPPXKNPXGGXPXKXGGPXKKKXPG 498
GG + PP PP + G P + GGP + PG
Sbjct: 269 GGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPG 305
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 603 KKXXXPPPXXXKKXXXPXKKXXXXGXVXPRGGXXWGXKXXFXPXXXKKXPPPKXXPPXKK 782
KK P ++ P KK + G K P K P PK PP
Sbjct: 1810 KKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSP 1869
Query: 783 KKK 791
KKK
Sbjct: 1870 KKK 1872
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 603 KKXXXPPPXXXKKXXXPXKKXXXXGXVXPRGGXXWGXKXXFXPXXXKKXPPPKXXPPXKK 782
KK P ++ P KK + G K P K P PK PP
Sbjct: 1810 KKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSP 1869
Query: 783 KKK 791
KKK
Sbjct: 1870 KKK 1872
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 603 KKXXXPPPXXXKKXXXPXKKXXXXGXVXPRGGXXWGXKXXFXPXXXKKXPPPKXXPPXKK 782
KK P ++ P KK + G K P K P PK PP
Sbjct: 1810 KKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSP 1869
Query: 783 KKK 791
KKK
Sbjct: 1870 KKK 1872
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 603 KKXXXPPPXXXKKXXXPXKKXXXXGXVXPRGGXXWGXKXXFXPXXXKKXPPPKXXPPXKK 782
KK P ++ P KK + G K P K P PK PP
Sbjct: 1810 KKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSP 1869
Query: 783 KKK 791
KKK
Sbjct: 1870 KKK 1872
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 402 KKXPPKKXPPXXKPPXGXPXKXGGPXK 482
++ PP PP PP G P + GGP K
Sbjct: 341 ERSPPTGSPPTGSPPTGRPPR-GGPGK 366
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 402 KKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXG 500
++ PP PP PP G P + G P P G
Sbjct: 408 RRSPPTGSPPTGSPPTGRPPR-GSPPTGSPPTG 439
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 402 KKXPPKKXPPXXKPPXGXPXKXGGPXK 482
++ PP PP PP G P + GGP K
Sbjct: 362 ERSPPTGSPPTGSPPTGRPPR-GGPGK 387
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 402 KKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXG 500
++ PP PP PP G P + G P P G
Sbjct: 429 RRSPPTGSPPTGSPPTGRPPR-GSPPTGSPPTG 460
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 402 KKXPPKKXPPXXKPPXGXPXKXGGPXK 482
++ PP PP PP G P + GGP K
Sbjct: 347 ERSPPTGSPPTGSPPTGRPPR-GGPGK 372
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 402 KKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXG 500
++ PP PP PP G P + G P P G
Sbjct: 414 RRSPPTGSPPTGSPPTGRPPR-GSPPTGSPPTG 445
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 409 PPXKXXPPXKNPXGGXPXKXGGPXKKKXPG 498
PP PP K+ G P GGP PG
Sbjct: 210 PPGPPGPPGKDGEAGAPGAPGGPGTDGAPG 239
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +3
Query: 321 GGXXPPXXXXXXXXXXXXXPXGGGXIXKKXPPKKXPPXX--KPPXGXPXKXGGP 476
GG PP P GG P PP PP G P GGP
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGP 1610
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 384 GGGXIXKKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXGG 503
GGG P PP PP P GG ++ GG
Sbjct: 292 GGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 384 GGGXIXKKXPPKKXPPXXKPPXGXPXKXGGPXKKKXPXGG 503
GGG P PP PP P GG ++ GG
Sbjct: 292 GGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.152 0.509
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,977,668
Number of Sequences: 27780
Number of extensions: 141274
Number of successful extensions: 536
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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