Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_P22
         (941 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     99   4e-21
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     97   1e-20
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    95   5e-20
03_05_0267 - 22538631-22539452                                         28   9.4  

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 44/64 (68%), Positives = 56/64 (87%)
 Frame = +2

Query: 107 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 286
           MP++I +IKDFL+ ARRKDA+SV+IK++ + VKFKVRCSR+LYTL + D +KA KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSL 60

Query: 287 PPGL 298
           PPGL
Sbjct: 61  PPGL 64


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 43/64 (67%), Positives = 55/64 (85%)
 Frame = +2

Query: 107 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 286
           MP++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSL 60

Query: 287 PPGL 298
           PPGL
Sbjct: 61  PPGL 64


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 42/63 (66%), Positives = 54/63 (85%)
 Frame = +2

Query: 110 PREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLP 289
           P++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSLP
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLP 91

Query: 290 PGL 298
           PGL
Sbjct: 92  PGL 94


>03_05_0267 - 22538631-22539452
          Length = 273

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 842 RAEPVKRPRWWXFSIGPAPLTSXP 913
           RA P  RPRWW  S    P +  P
Sbjct: 171 RASPPARPRWWPCSPSSPPASPSP 194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,389,524
Number of Sequences: 37544
Number of extensions: 272714
Number of successful extensions: 527
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)