Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_P19
(938 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 32 0.57
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.57
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 31 1.3
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 31 1.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 27 3.6
07_01_0479 + 3606663-3607448 29 4.0
07_01_0080 + 587674-588510 29 4.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.3
07_01_0862 - 7172083-7172931 29 5.3
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 28 9.3
05_01_0380 + 2978256-2979284 28 9.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 9.3
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 32.3 bits (70), Expect = 0.57
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 814 PXPGXFKNPXXFPPGXPPRGXXLSXPLPV----SRKPGPPFPPSG 936
P P F P PP PP L P P S +P PPFP G
Sbjct: 258 PPPQLFNWPGHAPPQLPPGASPLFPPGPAAFHPSSRPMPPFPGGG 302
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.57
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 808 GXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPG--PPFPPSG 936
G P P K P PP PP+G P P K G PP PP G
Sbjct: 343 GPPPPPPAKGP---PPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
P PP PP+G P P ++ P PP PP G
Sbjct: 332 PKAAPPPPPPKG---PPPPPPAKGPPPPPPPKG 361
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 850 PPGXPPRGXXLSXPLPVSRKPGPPFPPS 933
PP PP L P P RKP P PPS
Sbjct: 357 PPPPPPFAPTLPPPPPPRRKPPSPSPPS 384
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXP--PRGXXLSXPLPVSRKPGPPFPPSG 936
GGG P F P FPP P P P+P PG P P G
Sbjct: 500 GGGFGMPDPFGVPRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGG 546
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.1 bits (57), Expect(2) = 3.6
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 814 PXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
P P + P PP PP G S P P P PP PP
Sbjct: 84 PPPQMYYQP---PPPPPPYGVNSSQPPP--PPPPPPSPP 117
Score = 21.0 bits (42), Expect(2) = 3.6
Identities = 10/32 (31%), Positives = 11/32 (34%)
Frame = +1
Query: 616 PXQGXXSGFPXNRGIPXEKTXXPXGPXKGPXP 711
P Q P +G P P P GP P
Sbjct: 33 PQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPP 64
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/54 (40%), Positives = 22/54 (40%), Gaps = 9/54 (16%)
Frame = +1
Query: 802 GGGXPXPGXFKN-------PXXFP--PGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
GG P PG F P P PG PP G P P R PG P PP G
Sbjct: 199 GGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFR-PGMPPPPPG 251
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 823 GXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G F+ P PP P G P P P PP PP
Sbjct: 86 GMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 814 PXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
P P N P PPR P P KPG P PP
Sbjct: 601 PAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGPPPP 639
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = +1
Query: 814 PXPGXFKNPXXFPPGXPPRGXXLSXPLPV--SRKP---GPPFPP 930
P K FPP PPR + PLP+ +KP PP PP
Sbjct: 135 PPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPP 178
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 832 KNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFP 927
K P +PP PP+ L P P P PP P
Sbjct: 167 KKPLLYPPPLPPKKKPLPPPSP---PPQPPLP 195
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 680 TQXAPXRARNPKXGRXGXGFSQXXPPPRG 766
T AP + RNP G G Q PPRG
Sbjct: 17 TAAAPLQLRNPSPRGFGVGVGQPLLPPRG 45
>05_01_0380 + 2978256-2979284
Length = 342
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 850 PPGXPPRGXXLSXPLPVSRKPGPPFPPS 933
PP PP P P SRKP P PS
Sbjct: 28 PPPPPPPPPPPPPPRPFSRKPSEPAAPS 55
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 805 GGXPXPGXFKNPXXFPPGXPPRGXX-LSXPLPVSRKPGPPFPP 930
GG P P + PP PPRG + P P PP PP
Sbjct: 1171 GGTPPPNA--HGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPP 1211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,204,608
Number of Sequences: 37544
Number of extensions: 282998
Number of successful extensions: 918
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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