Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_P19
(938 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 34 0.86
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 34 0.86
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 34 0.86
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 34 0.86
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 34 0.86
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 34 0.86
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 34 0.86
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 33 2.0
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 33 2.0
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 33 2.0
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 2.6
AL035288-1|CAA22892.1| 671|Homo sapiens hypothetical protein pr... 31 4.6
AL021920-3|CAI19632.1| 671|Homo sapiens espin pseudogene protein. 31 4.6
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 31 6.0
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 6.0
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 6.0
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 6.0
X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1 p... 31 8.0
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 31 8.0
BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein. 31 8.0
BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein. 31 8.0
BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein. 31 8.0
AL158217-11|CAI22163.1| 854|Homo sapiens espin protein. 31 8.0
AL031848-3|CAI19773.1| 854|Homo sapiens espin protein. 31 8.0
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 31 8.0
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.86
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
G G P PG P FPP PP G L +P + P PP PP
Sbjct: 229 GSGLPPPG-MPPPGSFPPPVPPPG-ALPPGIPPAMPP-PPMPP 268
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 32.7 bits (71), Expect = 2.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPS 933
G G P P + P PP PP ++ P P + PP PP+
Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 32.7 bits (71), Expect = 2.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPS 933
G G P P + P PP PP ++ P P + PP PP+
Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 32.7 bits (71), Expect = 2.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPS 933
G G P P + P PP PP ++ P P + PP PP+
Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 32.3 bits (70), Expect = 2.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPS 933
G G P P + P PP PP + P P + PP PP+
Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPNRMYPPPPPA 349
>AL035288-1|CAA22892.1| 671|Homo sapiens hypothetical protein
protein.
Length = 671
Score = 31.5 bits (68), Expect = 4.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
P FPP PP G L P P P PP P
Sbjct: 336 PPSFPPPPPPPGTQLPPPPPSYPSPKPPVGP 366
>AL021920-3|CAI19632.1| 671|Homo sapiens espin pseudogene protein.
Length = 671
Score = 31.5 bits (68), Expect = 4.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
P FPP PP G L P P P PP P
Sbjct: 336 PPSFPPPPPPPGTQLPPPPPSYPSPKPPVGP 366
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
GGG P P PP PP P P P PP PP G
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPP----PPPPAPPPG 46
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
GGG P P PP PP P P P PP PP G
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPP----PPPPAPPPG 46
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
GGG P P PP PP P P P PP PP G
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPP----PPPPAPPPG 46
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
GGG P P PP PP P P P PP PP G
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPP----PPPPAPPPG 46
>X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1
protein.
Length = 309
Score = 30.7 bits (66), Expect = 8.0
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPV-SRKP-GPPFPPSG 936
P P G PP G PLP + KP GPP PP G
Sbjct: 262 PPRRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 30.7 bits (66), Expect = 8.0
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPV-SRKP-GPPFPPSG 936
P P G PP G PLP + KP GPP PP G
Sbjct: 115 PPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 149
>BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 30.7 bits (66), Expect = 8.0
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPV-SRKP-GPPFPPSG 936
P P G PP G PLP + KP GPP PP G
Sbjct: 262 PPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
>BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 30.7 bits (66), Expect = 8.0
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPV-SRKP-GPPFPPSG 936
P P G PP G PLP + KP GPP PP G
Sbjct: 262 PPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
>BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 30.7 bits (66), Expect = 8.0
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPV-SRKP-GPPFPPSG 936
P P G PP G PLP + KP GPP PP G
Sbjct: 262 PPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
>AL158217-11|CAI22163.1| 854|Homo sapiens espin protein.
Length = 854
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
P FPP PP G L P P P PP P
Sbjct: 434 PPSFPPPPPPPGTQLPPPPPGYPAPKPPVGP 464
>AL031848-3|CAI19773.1| 854|Homo sapiens espin protein.
Length = 854
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 838 PXXFPPGXPPRGXXLSXPLPVSRKPGPPFPP 930
P FPP PP G L P P P PP P
Sbjct: 434 PPSFPPPPPPPGTQLPPPPPGYPAPKPPVGP 464
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 8.0
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 802 GGGXPXPGXFKNPXXFPPGXPPRGXXLSXPLPVSRKPGPPFPPSG 936
GGG P +P PP PP P P P PP PP G
Sbjct: 6 GGGRPGESPGASPTTGPPPPPPPRPPKQQPPP----PPPPAPPPG 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,367,142
Number of Sequences: 237096
Number of extensions: 1725796
Number of successful extensions: 5633
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5381
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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