Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_P07
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0025 - 244068-244177,244279-244333,244500-244527,244621-24...    30   2.2  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.9  
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634...    29   3.9  
04_04_0037 + 22309681-22310532,22310638-22310977,22311613-22311749     29   6.7  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   8.9  

>06_01_0025 -
           244068-244177,244279-244333,244500-244527,244621-244691,
           244829-244926,245069-245186,245573-245636,245744-245808,
           245893-245928,246255-246311,246422-246691
          Length = 323

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 732 DRIAYLTEDVGLNAYYYYXHSHLPFWWNSGNTE---LQGTSW 848
           D IA ++ + GL   + + H      WNSGNTE   L G +W
Sbjct: 238 DCIARVSHEDGLVVGWIFLHELRQHLWNSGNTEIDVLNGIAW 279


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 267  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 365
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>03_02_0197 +
           6337212-6337278,6339261-6340517,6340599-6340626,
           6340735-6340897
          Length = 504

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 289 MKAYENFMMMYKVGFLPKNLEFSIFYE-KMREEAIALFKLFYYAKDFECFYKTACYARVY 465
           +  Y  +  M   G +P  L++++F      +EA+    L +Y   F+     A +A  Y
Sbjct: 197 LNVYPYYDYMRSNGVIP--LDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDAAYFAMAY 254

Query: 466 MNQGNVLIRLLHSYYP 513
           +N  NV + +  + +P
Sbjct: 255 LNVTNVPVMVTETGWP 270


>04_04_0037 + 22309681-22310532,22310638-22310977,22311613-22311749
          Length = 442

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 756 DVGLNAYYYYXHSHLPFWWNSGNTELQGTSW 848
           D     Y+Y  +   P WW++    L+  SW
Sbjct: 157 DAAYKVYWYCANRPFPLWWSAAACALEMASW 187


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 632 DEKICYNYGIIKENEQFVM 688
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,320,896
Number of Sequences: 37544
Number of extensions: 411553
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)