Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_P06
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1082 + 34399798-34399914,34400548-34400829,34401197-344016...    32   0.73 
11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257     31   1.7  
05_03_0193 + 9543565-9543691,9544016-9544202,9544956-9545352           30   2.9  
01_06_0418 + 29210310-29210612,29211154-29211541,29211946-292121...    30   2.9  
03_05_0829 + 28025760-28025846,28026366-28026473,28026721-280267...    29   5.2  
12_01_0013 - 99290-99299,99593-99703,100085-100587,100925-100995...    29   6.8  
04_03_0534 - 16845094-16845511,16846180-16846211                       29   6.8  
01_03_0207 - 13790801-13792057                                         28   9.0  
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716...    28   9.0  

>01_06_1082 +
           34399798-34399914,34400548-34400829,34401197-34401633,
           34401800-34401959,34402034-34402147
          Length = 369

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -1

Query: 473 DLNLELHCKSSKNMGVHSLGSPLNIGNLFHSKLLAN 366
           D  LELH   SK +  HS+GSP++   +   KLL N
Sbjct: 156 DEGLELHISESKALENHSVGSPVSPQLILFPKLLIN 191


>11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257
          Length = 921

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
 Frame = +2

Query: 623 VYCTHLHAE-YHEDDMY-LAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSY-K 793
           V   H+  + +H  D+Y + H +LQA+S    +KL  SPA  +  A +  TA   L Y  
Sbjct: 274 VQAAHIRIKGHHASDIYQVGHAILQAFSEYSLLKLPFSPASEASKATE--TAAHFLIYHH 331

Query: 794 IISQLXSLLDHIHEVE 841
           +++   S  +  HE E
Sbjct: 332 LVASQLSEHEIFHEEE 347


>05_03_0193 + 9543565-9543691,9544016-9544202,9544956-9545352
          Length = 236

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +3

Query: 552 IMVTGLEEKVWVSVGSSLGRDSSMSIAHIFTQNT 653
           I V GLEE++ V  GSSL R S  S+A ++ Q T
Sbjct: 129 IHVVGLEERMRVKNGSSLPRTSLSSMAILWQQAT 162


>01_06_0418 +
           29210310-29210612,29211154-29211541,29211946-29212143,
           29212626-29213092,29213210-29213749,29214275-29214477,
           29214567-29214624
          Length = 718

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 788 KTNPRVQYLNLQLV*KHQLVMMLI*RTLLLSMPEAHDELDTCR 660
           KT P V+ LNL LV K   VM++     L+ +    D  D CR
Sbjct: 580 KTTPVVEALNLMLVEKQPFVMIIESNRSLIGLVTLKDIQDFCR 622


>03_05_0829 +
           28025760-28025846,28026366-28026473,28026721-28026752,
           28026823-28026873,28027528-28027589,28027663-28027924,
           28028634-28028899,28029138-28029232,28029772-28029948
          Length = 379

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 425 VLPYSYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGYIHKIH 553
           VL Y Y      L SG+ +F+KWV+   +F ++P    +  IH
Sbjct: 8   VLTYLYLLIYVCLSSGVILFNKWVLSPKYF-KFPFPITLTMIH 49


>12_01_0013 -
           99290-99299,99593-99703,100085-100587,100925-100995,
           101413-101491,102336-102956
          Length = 464

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 608 ERLINVYCTHLHAEYHEDDMYL 673
           +R+I  Y  HL A++H+DD+ L
Sbjct: 37  DRIIAFYLAHLAADHHDDDLLL 58


>04_03_0534 - 16845094-16845511,16846180-16846211
          Length = 149

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -2

Query: 565 PVTMMYFVYVPIQGPLMEEDILD--YPFRKYTE 473
           P+ + + VY+P + P+M E ILD  + + +Y E
Sbjct: 83  PLILAFHVYIPDEVPMMVEGILDISHSYNRYIE 115


>01_03_0207 - 13790801-13792057
          Length = 418

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 437 SYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGY 538
           S++  SG+ G GLC FS W+++     QWP + +
Sbjct: 261 SFWGISGLSG-GLCYFSSWILK-----QWPKDSF 288


>01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,
            7161372-7162820
          Length = 1057

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +2

Query: 281  GIPVVSKNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYLKENL 418
            GI     N+KE +EA+++ +  ++ N + L  V S  D+L  + ++
Sbjct: 966  GITSHQMNRKEHFEALNSGMFSAKWNALQLGSVSSSADFLSARNSI 1011


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,715,002
Number of Sequences: 37544
Number of extensions: 504291
Number of successful extensions: 1118
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)