Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_P06
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82060-4|CAB04885.2|  434|Caenorhabditis elegans Hypothetical pr...   175   3e-44
AF016684-16|AAB66213.1|  506|Caenorhabditis elegans Hypothetical...    32   0.50 
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astaci...    29   6.1  
U39651-1|AAA80393.2|  260|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z82060-4|CAB04885.2|  434|Caenorhabditis elegans Hypothetical
           protein T27F6.6 protein.
          Length = 434

 Score =  175 bits (427), Expect = 3e-44
 Identities = 87/190 (45%), Positives = 120/190 (63%), Gaps = 5/190 (2%)
 Frame = +2

Query: 287 PVVSKNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYLKENLKNVLPYSYYFYSGVLG 466
           P+ S ++  R   I  Y++   ++IV LQE+WS  D++ L E + +V PY +YF+SG  G
Sbjct: 54  PIGSTDRVHRLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVSSVYPYFHYFHSGFTG 113

Query: 467 SGLCVFSKWVIQDVFFHQWPLNGYIHKIHHGDWFGGKGVGLCRIKF-GERLINVYCTHLH 643
           SG+CVFS+  I     +++ LNG+ H IH GDWFGGK VGL  I+  G+  +N Y THLH
Sbjct: 114 SGVCVFSRHPIVSTLTNRYSLNGFAHHIHRGDWFGGKVVGLTEIEIDGDLRVNFYTTHLH 173

Query: 644 AEY-HEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSYKIISQLXSLL 820
           AEY  E+D+YL HR  QA+  A+FV+ T+  ADV I+ GDLN  P DL +++I     L 
Sbjct: 174 AEYDRENDLYLPHRTAQAFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLF 233

Query: 821 D---HIHEVE 841
           D     HEVE
Sbjct: 234 DAWRMSHEVE 243


>AF016684-16|AAB66213.1|  506|Caenorhabditis elegans Hypothetical
           protein F45C12.16 protein.
          Length = 506

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +2

Query: 620 NVYCTHLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSY 790
           +VY  +LHA Y E       + L  Y       L +   +  I+ GDL    GD +Y
Sbjct: 325 DVYFKNLHANYCEGKEQYVKQALDMYEICWLTTLRALKPNCKIIGGDLKIQSGDEAY 381


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +2

Query: 656 EDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSYKIISQLXSLL 820
           E+D +LAH+ ++ YS+  FV L SS     IL  +++     ++Y  ++ + SLL
Sbjct: 39  ENDYFLAHQKVRLYSSHNFVMLYSSS---KILMMEIDDLEKMITYDDVADVVSLL 90


>U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astacin
           protease protein38 protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = +1

Query: 511 LPSVALEWVHTQNTSW*LVWRKRCGSLSDQVWGETHQCLLHTSSRRIPRRRHVSSSSCAS 690
           LP +   + H  N S         G   +QV+    QC    +  ++ R RH++   C  
Sbjct: 318 LPCLRNGYTHPNNCSMCACPEGLSGRYCEQVYPSNAQC----ARGKLTRERHINERECYQ 373

Query: 691 GILNSRVRQINIITS 735
             + +  +++  ITS
Sbjct: 374 SAIWTATKEVKYITS 388


>U39651-1|AAA80393.2|  260|Caenorhabditis elegans Hypothetical
           protein ZK470.2c protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/67 (23%), Positives = 31/67 (46%)
 Frame = +2

Query: 635 HLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNTAPGDLSYKIISQLXS 814
           H H  +H DD +  H+ +      +    T S +D  +    L  +  D ++  ++++ S
Sbjct: 11  HQHDHHHHDDHHDQHQEINLLQPPKVCLRTMSKSDPHLDIPHLLVSQ-DEAHPSLNKIMS 69

Query: 815 LLDHIHE 835
            L H+HE
Sbjct: 70  NLQHVHE 76


>Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 570 EEKVWVSVGSSLGRDSSMSIAHIFTQNTTKTTC 668
           ++ VW+ VGS L  + +  I  +F +NT K  C
Sbjct: 765 DDSVWLMVGSELLPNLNGKIVPLFDENTRKFDC 797


>Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 570 EEKVWVSVGSSLGRDSSMSIAHIFTQNTTKTTC 668
           ++ VW+ VGS L  + +  I  +F +NT K  C
Sbjct: 765 DDSVWLMVGSELLPNLNGKIVPLFDENTRKFDC 797


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,483,475
Number of Sequences: 27780
Number of extensions: 465617
Number of successful extensions: 1076
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)