Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_P01
         (946 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.1  
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568...    29   7.1  
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    28   9.4  
04_01_0080 - 889548-889892                                             28   9.4  
01_01_0162 - 1394980-1395760,1396024-1396037                           28   9.4  
01_01_0159 + 1380421-1381143                                           28   9.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +2

Query: 770 GXPLRVPPXXGXXGPPGRXGXRXRGIXXPPX-GGKRXPPXXXGIP 901
           G P   PP      PP   G +  G   PP  GG   PP   G+P
Sbjct: 352 GPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396


>01_06_1801 -
           39954425-39954533,39955289-39955578,39955786-39956838,
           39956998-39957263,39957345-39957420,39957525-39957605,
           39957676-39957831,39958565-39958669,39958761-39959367,
           39959514-39959585,39959802-39959953,39960063-39960240,
           39960642-39960745,39960822-39960953,39961036-39961132,
           39961280-39961407,39961533-39961592,39962799-39962918,
           39963011-39963091,39963173-39963361,39963826-39964024,
           39964177-39964257,39964398-39964588,39965226-39965382,
           39965986-39966119,39966266-39966334,39966434-39966481,
           39966572-39966646,39967112-39967192,39967399-39967461,
           39967564-39967623,39967754-39967795,39968777-39968902,
           39969027-39969176
          Length = 1843

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 328 ASFRVPDXRPVAEALWYVAWAHVVNEI 248
           A+FRVPD  P+A  L+ + WA V  ++
Sbjct: 29  AAFRVPDPVPMARFLYELCWAVVRGDL 55


>10_08_0894 -
           21365629-21365766,21365849-21365950,21366042-21366284,
           21366685-21366813,21366999-21367103,21367196-21367387,
           21367486-21367639,21368148-21368209,21368291-21368437,
           21368517-21368564,21369091-21369228,21369305-21369451,
           21370579-21370665,21370754-21370861,21370941-21371041,
           21371870-21371996,21372820-21372936,21373029-21373106,
           21373240-21373284,21373637-21373756,21373838-21373964,
           21374033-21374253,21374347-21374529,21374772-21374924,
           21375051-21375146,21375226-21375331,21375410-21375492,
           21375576-21375728,21375819-21376058,21376367-21376414,
           21376782-21376928,21377007-21377115,21377200-21377345,
           21377715-21377809,21377944-21378049,21378177-21378368,
           21378456-21378686,21378772-21378866,21379426-21379529,
           21380040-21380284,21380300-21380347,21380376-21380480,
           21380630-21380767,21381458-21381649,21381738-21381914,
           21382001-21382129,21382203-21382316,21382407-21382746,
           21382836-21383064,21383155-21383455,21384311-21384358,
           21387963-21388355
          Length = 2493

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 142 VTDSCHNKQQIQIKLFIGNVLFHQCK 65
           + D C     + IKL +G+VL H CK
Sbjct: 709 ILDICRESCPLIIKLSLGDVLLHNCK 734


>04_01_0080 - 889548-889892
          Length = 114

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = -3

Query: 374 IDLHNFINIQIPVHICQFSC 315
           +D+H+++N+ + + +C+F C
Sbjct: 84  VDIHDYLNLALHMQLCRFGC 103


>01_01_0162 - 1394980-1395760,1396024-1396037
          Length = 264

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
 Frame = +2

Query: 167 RKCPKGEHSVLY-----CPQMAXPDCENPEVHDFVDHVGPCDVPQCFCDRP 304
           R+C   +H +LY     CP  A         HD   H   C    CFC  P
Sbjct: 33  RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 82


>01_01_0159 + 1380421-1381143
          Length = 240

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
 Frame = +2

Query: 167 RKCPKGEHSVLY-----CPQMAXPDCENPEVHDFVDHVGPCDVPQCFCDRP 304
           R+C   +H +LY     CP  A         HD   H   C    CFC  P
Sbjct: 9   RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,277,661
Number of Sequences: 37544
Number of extensions: 366981
Number of successful extensions: 688
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)