Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_P01
(946 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 33 1.1
J04564-1|AAA60151.1| 285|Homo sapiens SNRPB protein. 33 1.1
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 33 1.1
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 33 1.1
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 33 1.1
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 33 1.1
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 33 1.1
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 33 1.1
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 33 1.1
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 33 1.5
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 33 1.5
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 33 1.5
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 4.6
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 31 6.1
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 6.1
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 6.1
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 6.1
X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich pro... 31 8.1
S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein. 31 8.1
S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-ri... 31 8.1
M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich pro... 31 8.1
M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collage... 31 8.1
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 31 8.1
L12347-1|AAA36358.1| 718|Homo sapiens collagen protein. 31 8.1
K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein. 31 8.1
D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain pr... 31 8.1
BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alp... 31 8.1
BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alp... 31 8.1
BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein. 31 8.1
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 31 8.1
AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.1
AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.1
AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.1
AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.1
AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha... 31 8.1
AL035669-11|CAI95767.2| 191|Homo sapiens collagen type IX alpha... 31 8.1
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 31 8.1
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 31 8.1
AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 ch... 31 8.1
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>J04564-1|AAA60151.1| 285|Homo sapiens SNRPB protein.
Length = 285
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = +2
Query: 764 LXGXPLRVPPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRX 943
+ G P + PP G P GR G G+ PP G R P GIP P G
Sbjct: 161 IAGAPTQYPPGLGPPPPMGR-GAPPPGMMGPPP-GMRPPMGPMGIPPGRGTPMGMPSGMR 218
Query: 944 P 946
P
Sbjct: 219 P 219
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 252 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 894 PXXLGGXLXPPXGGXXIPLXRXPXRPGGPXXPWXGG 787
P +GG PP G +P PGGP PW G
Sbjct: 209 PHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 244
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 146 TGQHFPTRKCPKGEHSVLYCPQMAXPDCENPEVHDFVDHVGPCDVP 283
T + P P G H + P P +P HDF D+ GPCD P
Sbjct: 376 THRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 146 TGQHFPTRKCPKGEHSVLYCPQMAXPDCENPEVHDFVDHVGPCDVP 283
T + P P G H + P P +P HDF D+ GPCD P
Sbjct: 376 THRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 146 TGQHFPTRKCPKGEHSVLYCPQMAXPDCENPEVHDFVDHVGPCDVP 283
T + P P G H + P P +P HDF D+ GPCD P
Sbjct: 376 THRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
P PP GPP + G R R PP + PP P+ P+G P
Sbjct: 51 PQGPPPPGKPQGPPPQGGKRSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 107
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 785 VPPXXGXXGPPGRXGXRX-RGIXXPPXGGKRXPPXXXGIP 901
VP G G PGR G G+ PP G + PP G P
Sbjct: 567 VPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYP 606
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 785 VPPXXGXXGPPGRXGXRX-RGIXXPPXGGKRXPPXXXGIP 901
VP G G PGR G G+ PP G + PP G P
Sbjct: 567 VPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYP 606
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 785 VPPXXGXXGPPGRXGXRX-RGIXXPPXGGKRXPPXXXGIP 901
VP G G PGR G G+ PP G + PP G P
Sbjct: 567 VPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYP 606
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 785 VPPXXGXXGPPGRXGXRX-RGIXXPPXGGKRXPPXXXGIP 901
VP G G PGR G G+ PP G + PP G P
Sbjct: 567 VPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYP 606
>X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich
protein protein.
Length = 297
Score = 30.7 bits (66), Expect = 8.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 788 PPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
PP GPP + G R +G PP G + PP R P+G P
Sbjct: 140 PPPGKPQGPPQQGGNRPQG--PPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPP 190
>S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein.
Length = 358
Score = 30.7 bits (66), Expect = 8.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 788 PPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
PP GPP + G R +G PP G + PP R P+G P
Sbjct: 201 PPPGKPQGPPQQGGNRPQG--PPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPP 251
>S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-rich
protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 8.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 788 PPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
PP GPP + G R +G PP G + PP R P+G P
Sbjct: 174 PPPGKPQGPPQQGGNRPQG--PPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPP 224
>M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich
protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 8.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 788 PPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
PP GPP + G R +G PP G + PP R P+G P
Sbjct: 174 PPPGKPQGPPQQGGNRPQG--PPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPP 224
>M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collagen
protein.
Length = 599
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 347 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 404
>L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPP-XGGKRXPPXXXGI 898
P P G GPPG G +G+ PP G PP G+
Sbjct: 96 PKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGL 137
>L12347-1|AAA36358.1| 718|Homo sapiens collagen protein.
Length = 718
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 267 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 324
>K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein.
Length = 331
Score = 30.7 bits (66), Expect = 8.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 788 PPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
PP GPP + G R +G PP G + PP R P+G P
Sbjct: 174 PPPGKPQGPPQQGGNRPQG--PPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPP 224
>D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain
precursor protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein.
Length = 338
Score = 30.7 bits (66), Expect = 8.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 788 PPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPRKXXXXKXXPKGRXP 946
PP GPP + G R +G PP G + PP R P+G P
Sbjct: 181 PPPGKPQGPPQQGGNRPQG--PPPPGKPQGPPPQGDKSRSPQSPPGKPQGPPP 231
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPP-XGGKRXPPXXXGI 898
P P G GPPG G +G+ PP G PP G+
Sbjct: 96 PKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGL 137
>AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 372 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 429
>AL035669-11|CAI95767.2| 191|Homo sapiens collagen type IX alpha 3
protein.
Length = 191
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPP-XGGKRXPPXXXGI 898
P P G GPPG G +G+ PP G PP G+
Sbjct: 59 PKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGL 100
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPP-XGGKRXPPXXXGI 898
P P G GPPG G +G+ PP G PP G+
Sbjct: 96 PKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGL 137
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPP-XGGKRXPPXXXGI 898
P P G GPPG G +G+ PP G PP G+
Sbjct: 96 PKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGL 137
>AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 chain
protein.
Length = 1143
Score = 30.7 bits (66), Expect = 8.1
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGP---PGRXGXR-XRGIXXPPXGGKRXPPXXXGIP 901
P P+G++ P +P G GP PG+ G R RG PP GK PP G P
Sbjct: 373 PGPKGEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPP--GKPGPPGPPGPP 430
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,256,912
Number of Sequences: 237096
Number of extensions: 2283893
Number of successful extensions: 5176
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5077
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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