Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_P01
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 37 0.024
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.91
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 0.91
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.7
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 8.5
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 8.5
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 36.7 bits (81), Expect = 0.024
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 161 PTRKCP-KGEHSVLYCPQMAXPDC--ENPEVHDFVDHVGPCDVPQCFCDRPXVRNTKTGK 331
P RK +G+ + C P C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 332 CVPESEC 352
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 203 CPQMAXPDCENPEVHDFVDHVGPCDVPQCFCDRPXVRNTKTGKCVPESEC 352
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.91
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPR 904
P R+P G G P G R P GG R P G+PR
Sbjct: 186 PPRMPIGHGPPGGPPMPGPPQRSRFDQPDGGDRWGPPMRGVPR 228
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.91
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 776 PLRVPPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIPR 904
P R+P G G P G R P GG R P G+PR
Sbjct: 186 PPRMPIGHGPPGGPPMPGPPQRSRFDQPDGGDRWGPPMRGVPR 228
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2
Query: 734 PTPRGKRXVFLXGXPLRVPPXXGXXGPPGRXGXRXRGIXXPPXGGKRXPPXXXGIP 901
P PRG G P + P G G PGR G R RG+ P G+ PP G P
Sbjct: 169 PGPRGPAGD--AGSPGQ-PGHPGSPGNPGRGGQRSRGLPGP--SGRPGPPGPAGGP 219
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 800 GXXGPPGRXGXRXRGIXXPPXG-GKRXPPXXXGIP 901
G G PG+ G R RG+ P G + PP G P
Sbjct: 190 GNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQP 224
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 800 GXXGPPGRXGXRXRGIXXPPXG-GKRXPPXXXGIP 901
G G PG+ G R RG+ P G + PP G P
Sbjct: 190 GNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQP 224
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 188 HSVLYCPQ-MAXPDCENPEVHDFVDHVGPCDVP-QCFCDRPXVRNTKTGKCVPESEC-** 358
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 359 NCVN 370
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 188 HSVLYCPQ-MAXPDCENPEVHDFVDHVGPCDVP-QCFCDRPXVRNTKTGKCVPESEC-** 358
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 359 NCVN 370
+CVN
Sbjct: 217 DCVN 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,540,953
Number of Sequences: 27780
Number of extensions: 329147
Number of successful extensions: 844
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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