Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_O23
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 54 1e-07
11_01_0771 + 6453130-6454488 47 2e-05
01_01_1152 + 9170628-9171899 45 7e-05
11_01_0750 - 6315126-6315896,6316371-6316784 44 2e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 43 4e-04
11_02_0011 - 7337618-7338496,7338596-7338991 42 7e-04
11_02_0012 - 7346282-7347136,7347234-7347593 42 9e-04
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 42 9e-04
11_02_0014 - 7352619-7352918,7353173-7353418 39 0.006
11_01_0767 + 6438648-6438809,6439146-6440000 38 0.008
03_05_0294 + 22855503-22855946,22856346-22856399 29 6.7
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994... 28 8.8
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +2
Query: 431 ANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFSAP-KNAADIINRWADEQTQGHIKTPV 604
AN ++V +L A++R A+ +R+E ++F + A IN W + T G IK +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161
Query: 605 SEDKIDPATAVAMFNVIFFQGHWHVPFNASET 700
+D +D AT + N ++F+G W F+A T
Sbjct: 162 PKDAVDRATPAVLGNALYFKGDWESKFDARST 193
>11_01_0771 + 6453130-6454488
Length = 452
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2
Query: 554 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEXK 709
IN WA T I + + P TAV + N I+F+G W PFN S+TE K
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
>01_01_1152 + 9170628-9171899
Length = 423
Score = 45.2 bits (102), Expect = 7e-05
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +2
Query: 533 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 700
P+ A + +N + + T+G I+ + + +D +T V + N + F+G W +PF+ S T
Sbjct: 156 PEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +2
Query: 383 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 556
+L R P+ L A ++ L+ F A N++ S +F + P++A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 557 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 673
N W + T+G + T + ID T + + + ++F+G W
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 42.7 bits (96), Expect = 4e-04
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 545 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 703
A +N W D T G IK + +D T + + N ++F+G W F+AS+T+
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTK 58
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 41.9 bits (94), Expect = 7e-04
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 440 IYVSDQYKLADAF-SRTANLFRSEVDNINFSA-PKNAADIINRWADEQTQGHIKTPVSED 613
++ + +L A+ + A +++ NF PK + IN+W + T I + +
Sbjct: 100 VWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDG 159
Query: 614 KIDPATAVAMFNVIFFQGHWHVPFNASET 700
+ TA+ + N I+F+G W PF S T
Sbjct: 160 SVHVDTALVLVNAIYFKGKWSNPFPRSST 188
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 41.5 bits (93), Expect = 9e-04
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 533 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 700
PK++ IN+W + T I+ + + + TA+ + N I+F+G W PF T
Sbjct: 121 PKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERT 176
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 41.5 bits (93), Expect = 9e-04
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 545 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 703
A +N W ++ T G IK + +D T + + N ++F+G W F+AS+T+
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTK 266
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 554 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 703
+N W D T G IK + I+ T + + N ++F+G W F+ S+TE
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTE 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 244 KNVIASPLGVMLLLSLYESGAGAQSKEEIREIL 342
+NV SPL + + LSL +GAG +++++ L
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASAL 67
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 533 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPF-NASETEXK 709
PK + IN W + T I + + + T + + N I+F+G W PF S T K
Sbjct: 83 PKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGK 142
Query: 710 ----DXTSMKKRSSRNRQ 751
D +S+ R R+R+
Sbjct: 143 FHRLDGSSVNVRFMRSRE 160
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +2
Query: 443 YVSDQYKLADAF-SRTANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDK 616
++ Y L A+ ++ ++F + P A IN W T+ I + +
Sbjct: 23 WLDASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPES 82
Query: 617 IDPATAVAMFNVIFFQGHWHVPFNASETEXKD 712
T + N I+F+G W PF+ S+T ++
Sbjct: 83 QSVDTRHVVGNAIYFKGEWLAPFDKSDTAERE 114
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 235 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREIL 342
A NV SPL + + LSL +GAG +++++ +L
Sbjct: 41 AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLL 76
>10_08_0460 -
18098187-18098248,18098331-18098399,18098468-18099434,
18100089-18100808,18100942-18101031,18101076-18101138,
18101223-18101366,18101471-18101527,18101606-18101680,
18101757-18101836,18101937-18102050,18102166-18102258,
18102470-18102553,18102812-18102859,18105207-18105337,
18105903-18106135
Length = 1009
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +3
Query: 234 SRRQECDSVSSRRDAAAFLVRVWSRCTVQGRDKGNPWGRGRLKSQHTH 377
++++ + V+ ++ LV+ +CT+ ++ G W RL H H
Sbjct: 539 NKKKSNEQVTEQQRETVVLVKTNCKCTMVAKEVGQFWQISRLDLNHNH 586
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,423,766
Number of Sequences: 37544
Number of extensions: 430747
Number of successful extensions: 1229
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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