Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_O16
         (926 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.74 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.7  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   3.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   3.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   3.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   9.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   9.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   9.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   9.1  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.74
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 445 GNSQYLDTQKWCKDLSGTGILYVGM 519
           G+   L+TQ   K +S  G+L+VG+
Sbjct: 295 GSEDILNTQSLAKAVSKNGVLFVGL 319


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 540 WCTIWTIFDAW 572
           WC+IW   D W
Sbjct: 137 WCSIWLAVDVW 147


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 445 GNSQYLDTQKWCKDLSGTGILYVGM 519
           G    LDTQ   K +S +G+L+ G+
Sbjct: 297 GVQNILDTQSSAKVVSKSGVLFFGL 321


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 445 GNSQYLDTQKWCKDLSGTGILYVGM 519
           G    LDTQ   K +S +G+L+ G+
Sbjct: 297 GVQNILDTQSSAKVVSKSGVLFFGL 321


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 445 GNSQYLDTQKWCKDLSGTGILYVGM 519
           G    LDTQ   K +S +G+L+ G+
Sbjct: 297 GVQNILDTQSSAKVVSKSGVLFFGL 321


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 612 ENFFYMWPCSRMPTRHQRWSISCTIFTSTYTH 517
           + FF     SR      RWSIS T+F     H
Sbjct: 149 QEFFPECKWSRKGFLRTRWSISGTVFDLINIH 180


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = +1

Query: 580 PAAWPHIKEIFQAICAKANDEPCCDW--VGEDGAGHFVKMVHNGIE 711
           PA    +KE +  +CA       CD+  +     G    + HNG E
Sbjct: 205 PAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNGGE 250


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = +1

Query: 580 PAAWPHIKEIFQAICAKANDEPCCDW--VGEDGAGHFVKMVHNGIE 711
           PA    +KE +  +CA       CD+  +     G    + HNG E
Sbjct: 205 PAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNGGE 250


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = +1

Query: 580 PAAWPHIKEIFQAICAKANDEPCCDW--VGEDGAGHFVKMVHNGIE 711
           PA    +KE +  +CA       CD+  +     G    + HNG E
Sbjct: 205 PAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNGGE 250


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 186 THNSQTYECNISFILRHFFKLDFKSLSNY 100
           T  SQ Y   +S +L H F     S+S+Y
Sbjct: 478 TGTSQMYAEKLSELLGHAFHSQVLSMSDY 506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,594
Number of Sequences: 438
Number of extensions: 5399
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)