Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_O14
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0578 + 4295386-4296489,4297394-4297507                          264   7e-71
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...   264   9e-71
10_02_0199 + 6668902-6669293,6669825-6669882                           34   0.18 
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239...    33   0.24 
08_02_1278 - 25838146-25839411                                         32   0.55 
03_05_0366 - 23505755-23506441                                         31   1.3  
06_01_0017 + 189346-189561,189614-189905,190024-190043                 31   1.7  
04_01_0588 + 7657510-7657992,7658397-7658843                           29   6.8  
02_04_0457 + 23093020-23093343,23093798-23093806                       29   6.8  

>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score =  264 bits (647), Expect = 7e-71
 Identities = 126/228 (55%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
 Frame = +3

Query: 225 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 404
           VF+AP+RPD+V  VH  +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31  VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90

Query: 405 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 584
           +GQGAFGNMCRGGRMFAPTK WR+WH                          ARGH IE 
Sbjct: 91  AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIET 150

Query: 585 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 764
           +PELPLV++D  + I KT QA+  L+++ A++D  K   S  +R GKGKMRNRR I RKG
Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKG 210

Query: 765 XLIIFNKD-QGLTRAFRNIPGVEXXXXXXXXXXXXAPGRHLGRFVIWT 905
            LI++  +   + +AFRN+PGV+            APG HLGRFVIWT
Sbjct: 211 PLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWT 258


>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score =  264 bits (646), Expect = 9e-71
 Identities = 127/231 (54%), Positives = 153/231 (66%), Gaps = 1/231 (0%)
 Frame = +3

Query: 216 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 395
           +P V +APIRPD+V   H  +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGG
Sbjct: 27  MPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGG 86

Query: 396 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 575
           THR+GQGAFGNMCRGGRMFAPTK WRRWH                          ARGH 
Sbjct: 87  THRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHR 146

Query: 576 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 755
           IE +PE PLVV+D ++ I KT Q++  L+++ A++D  K   S  +RAGKGKMRNRR I 
Sbjct: 147 IEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYIN 206

Query: 756 RKGXLIIFNKD-QGLTRAFRNIPGVEXXXXXXXXXXXXAPGRHLGRFVIWT 905
           RKG LI++  +   + +AFRN+PGV+            APG HLGRFVIWT
Sbjct: 207 RKGPLIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWT 257


>10_02_0199 + 6668902-6669293,6669825-6669882
          Length = 149

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +3

Query: 336 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 446
           A+SW TGRA A + R R GG  R    A  N   G R
Sbjct: 36  AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72


>06_02_0298 +
           13921310-13921834,13921923-13922063,13923601-13923951,
           13924071-13924130,13924261-13924380,13924569-13924718
          Length = 448

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -3

Query: 442 PPRHMLPKAP*PDLWVPPP 386
           PPRH++P+ P P  WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325


>08_02_1278 - 25838146-25839411
          Length = 421

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -2

Query: 665 APQEDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSL 558
           A +E   LF L+D+LD V+  +G+L  LF+  S++L
Sbjct: 89  AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124


>03_05_0366 - 23505755-23506441
          Length = 228

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +3

Query: 222 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 398
           ++  AP   D   +V  S +   R  P C S E   + +AES  TG A  R  R+  G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167

Query: 399 HRSGQGA 419
           + + + A
Sbjct: 168 NDNDEEA 174


>06_01_0017 + 189346-189561,189614-189905,190024-190043
          Length = 175

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = -2

Query: 659 QEDDS--LFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSNGCCQGR--SPLSEV 492
           +EDD   L G   ++ F + +        N+ +S L+ +WDAGS +        SPLS V
Sbjct: 75  KEDDKYVLHGWQKVMSFQARDSSN-SKAGNDSTSKLSFKWDAGSCSSASSSAMYSPLSAV 133

Query: 491 DATVPAP 471
            A   AP
Sbjct: 134 SAPAKAP 140


>04_01_0588 + 7657510-7657992,7658397-7658843
          Length = 309

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +3

Query: 258 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 428
           +D+    ++ SR    +   +  ++S+  W  G    R+  +    GGG  R      G 
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260

Query: 429 MCRGGRMFAPTKPWRRW 479
                    P  PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277


>02_04_0457 + 23093020-23093343,23093798-23093806
          Length = 110

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 321 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 425
           G + S   W  G A A    VRGGG  RSG G  G
Sbjct: 76  GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,425,293
Number of Sequences: 37544
Number of extensions: 575135
Number of successful extensions: 1793
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)