Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_O09
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-8|CAA86746.1|  253|Caenorhabditis elegans Hypothetical pr...    32   0.49 

>Z46787-8|CAA86746.1|  253|Caenorhabditis elegans Hypothetical
           protein C16C10.8 protein.
          Length = 253

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 83  KCRNTCLSCLICAYIST-----GHGKTVIVGQTYDYNNVVRKVHEQSVEANA-IPLFKRV 244
           +CRNT  SC+ C  + T      H K +   Q Y   N V K ++   + NA +    R 
Sbjct: 24  QCRNTTFSCIDCQLVYTRETYKDHVKCITENQKYGGKNYVEKENKGEAKQNAWVDQVNRA 83

Query: 245 QEVFFEFPQPEQKIKGIA 298
            E F    Q ++ +K +A
Sbjct: 84  IE-FVTDSQVKELLKSVA 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,954,580
Number of Sequences: 27780
Number of extensions: 216040
Number of successful extensions: 591
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)