Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_O08
(917 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0135 + 17602684-17602986,17603831-17603854,17606801-17607196 36 0.060
12_01_0389 + 3067808-3069121 34 0.18
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610... 31 0.97
02_01_0335 + 2386902-2386906,2386976-2387282,2387664-2387777,239... 31 1.3
04_01_0421 - 5565494-5565592,5565898-5565984,5567164-5567253,556... 30 2.2
10_02_0049 - 4580417-4580602,4580955-4581833 30 3.0
06_03_1310 + 29238644-29240260 30 3.0
01_06_0690 + 31265682-31265834,31266045-31266273,31266989-31267395 30 3.0
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844... 29 5.2
07_03_0736 - 21079880-21080185,21080231-21080429,21080531-210807... 29 6.8
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 29 6.8
09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094 28 9.0
08_01_0311 - 2753062-2753232,2753340-2753381,2754490-2754667,275... 28 9.0
03_04_0220 - 18741485-18741915,18742007-18742190 28 9.0
02_04_0130 + 20025414-20025531,20026357-20026585,20026909-200270... 28 9.0
>03_04_0135 + 17602684-17602986,17603831-17603854,17606801-17607196
Length = 240
Score = 35.5 bits (78), Expect = 0.060
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 557 DLGSEVHVLRQHGGGSARRVPPAHAAGVLWEGA 655
D G E HVL GGGS +PP+H+A + W G+
Sbjct: 6 DDGGEAHVLTDGGGGSGG-LPPSHSASLWWLGS 37
>12_01_0389 + 3067808-3069121
Length = 437
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -1
Query: 644 TIRRLHGQVAHAARTPLRVVVKRALPTPSPINEIVQYDQISRPVFFN*RPGGGRGEYV-S 468
T+RRL H+ TP V +R+ P+P P+ E+ D + R V GGG G +
Sbjct: 63 TLRRLIHSWHHSTTTPFPV--ERSTPSPPPLREVDDDDVVERLVME--MEGGGGGSWCPP 118
Query: 467 AADLL-QCPNISSIVHIARLKLMFSAV 390
+ DLL + +++ +AR +++ + V
Sbjct: 119 SCDLLREAAAVAAGSGVARRRMVGAGV 145
>01_05_0439 - 22159425-22159520,22160137-22160345,22161028-22161066,
22161196-22161356,22161447-22161518,22162002-22162183,
22162580-22162703,22164196-22164299,22165526-22165725,
22165838-22166069,22166156-22166239,22166329-22166386,
22166724-22166771,22167924-22168081,22168451-22168501,
22168585-22168658,22168760-22168835,22169685-22169729,
22169833-22169899,22169978-22170095,22170580-22170775,
22171551-22171640,22171985-22172039,22172755-22172975,
22173362-22173454,22173608-22173721,22173918-22173981,
22174081-22174181,22174306-22174447,22174528-22174729,
22174883-22174976,22176172-22176348
Length = 1248
Score = 31.5 bits (68), Expect = 0.97
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 426 NYRANIWALKQVGCTHVLATTATGSLVEEYRPGDLVILDDFIDRTWGRKCTFYDNTEGGP 605
++ A +W+L + C VLA A L EY P D I+ D F++N EGG
Sbjct: 1096 DWTARVWSLTRGTCDAVLACHAGPILCVEYSPSDKGIITGSSDGL----IRFWEN-EGGI 1150
Query: 606 RGVCHLPMQPA 638
R V +L + A
Sbjct: 1151 RCVKNLTLHSA 1161
>02_01_0335 +
2386902-2386906,2386976-2387282,2387664-2387777,
2390252-2390320,2390416-2390715,2390829-2390930,
2391085-2391279,2391377-2391664,2391942-2392128,
2393168-2393272,2393778-2393824,2393982-2394074
Length = 603
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 347 YQYVRGSP-KRCDHLL-FDLILEKRRIVEARTSDNSDLYFSYIAHIDGTIQH 198
+ YV+ +P K D ++ F ++ EK R E SD+ YF I H +G I H
Sbjct: 417 FPYVKENPVKPTDAVVKFYVLYEKWRRAEVPKSDSVTQYFKNITHANGVIIH 468
>04_01_0421 -
5565494-5565592,5565898-5565984,5567164-5567253,
5567366-5567532,5567541-5567799
Length = 233
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -1
Query: 206 IQHYTHRYKNFPISVK*VTAYIMCLLL 126
I + T+RY++ PI + +T Y++CL++
Sbjct: 180 ISYATNRYQSIPIGLSSITRYLVCLVM 206
>10_02_0049 - 4580417-4580602,4580955-4581833
Length = 354
Score = 29.9 bits (64), Expect = 3.0
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = -1
Query: 638 RRLHGQVAHAAR-TPLRVVVKRALPTPSPINEIVQYDQISRPVFFN*RPGGGRGEYV--- 471
RR+HG+ A R L V+ + NEI + D I R +F + GG +
Sbjct: 251 RRMHGRTAGEPRKNDLLDVMLEEGESKEDSNEINR-DAI-RGLFTDLFTGGETTSHTMEC 308
Query: 470 SAADLLQCPNISSIVHIARLKLMFSAVSCQQNALDPFDLTLYQYVRGSPK 321
+ A+LLQCPN VH LK S + +Q +D D+T Y PK
Sbjct: 309 AMAELLQCPNSMRRVH--ELK---SVIGSKQQ-MDEHDITKLPYHHTRPK 352
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 665 QCGARPPTIRRLHGQ---VAHAARTPLRVVVKRALPTPSP 555
QC A PPT RR G+ H + P + +R PTP P
Sbjct: 361 QCQATPPTTRRPGGRTPLAPHRSPLPHHMPPRRTPPTPPP 400
>01_06_0690 + 31265682-31265834,31266045-31266273,31266989-31267395
Length = 262
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 595 RGVRAACATCPCSRRIVGGRAPHCTAR 675
R +RAA A C C+RR G CT R
Sbjct: 73 RKMRAAGAVCSCARRAAAGDCRSCTLR 99
>01_07_0232 +
42182942-42183490,42183593-42183661,42184320-42184451,
42184547-42184600,42184714-42184758,42185383-42185522,
42185777-42185902,42185985-42186002,42186631-42187276,
42188121-42188843
Length = 833
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 652 RAPHCTARX--SLXGTRAMKPALRLSYRDPDSQVAPKAWSIDNGGG 783
R+PH +R +L +RA+ LRL R P Q+ P + +GGG
Sbjct: 31 RSPHQASRRLSALPFSRALPLPLRLRLRIPRPQLPPLPLAFSHGGG 76
>07_03_0736 -
21079880-21080185,21080231-21080429,21080531-21080768,
21080888-21081098,21081181-21081320,21081400-21081537,
21086208-21087036
Length = 686
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 624 PMQPAYCGRARAALYSAXKSXGYSCHETGTAVVIQG 731
P +PA+C R A S G + T TA +QG
Sbjct: 650 PSKPAFCARRNGGTGGAGASSGGTSSGTSTAASVQG 685
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 242 DRNYRRFGLRRSDAFRESNRKGGGHTVWETLGRTDRGSNQTGPMR 376
+R+ RR G + R S ++GGG +W T+ R D+ + R
Sbjct: 265 ERSGRRSGATAAGLAR-SRQRGGGSVMWGTVERVDKAARPRAAQR 308
>09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094
Length = 326
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 534 ILDDFIDRTWGRKCTFYDNTEGGPRGVCHL 623
I D ++ TW RK T D+ EG R C L
Sbjct: 195 ISDGWVAATWSRKITLEDSWEGDWRKDCEL 224
>08_01_0311 -
2753062-2753232,2753340-2753381,2754490-2754667,
2755021-2755118,2755964-2756098,2756280-2756444,
2756529-2756693,2757082-2757299,2758508-2758811
Length = 491
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 645 HNTPAAWAGGTRRADPPPCCRKTCTSD--PKSYQ*NRPI*PDLQACILQLETR--WRSW 481
HN A AG RA+PP R TC +D P+S Q + DL Q+ TR W S+
Sbjct: 30 HNL-AHLAGEVGRAEPPVRLRVTCLADPHPESLQLGLQLAADLALPAPQVYTRTPWPSY 87
>03_04_0220 - 18741485-18741915,18742007-18742190
Length = 204
Score = 28.3 bits (60), Expect = 9.0
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Frame = +2
Query: 602 SARRVPPAHAA-GVLWEG-------ARRTVQRGQVXGVLVP*NRHCGCHTGTQILKSRRK 757
+ R + P H A G+LW G A TV RG G L CG G ++R
Sbjct: 72 AGRTINPVHGAVGLLWTGNWPLCQAAVETVLRGGAIGPLPELGGACGGAGGDLYGAAKRN 131
Query: 758 LGP*TMGVAILVNMTTVPE 814
G T A V VPE
Sbjct: 132 GGWSTFSTAKRVRKAEVPE 150
>02_04_0130 +
20025414-20025531,20026357-20026585,20026909-20027032,
20027441-20027497,20027613-20027804,20027882-20027959,
20028437-20028619,20028715-20028795,20029196-20029228,
20029448-20029513,20029591-20029683,20030106-20030231,
20030395-20030508,20030973-20031068,20031159-20031256,
20031416-20031831,20032025-20032473,20032810-20032905
Length = 882
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 269 EARTSDNSDLYFSYIAHIDGTIQHYTHRYKNFPISVK 159
+A TS N + +FS H T++H+ +K+ P +VK
Sbjct: 714 DATTSSNGEAFFSSDLHKPKTLEHFWDSFKS-PTAVK 749
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,018,782
Number of Sequences: 37544
Number of extensions: 593328
Number of successful extensions: 1628
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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