Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_O08
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23168-10|AAC38810.2|  288|Caenorhabditis elegans Hypothetical p...   200   1e-51
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p...    30   2.7  
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr...    30   2.7  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ...    29   4.7  
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ...    29   4.7  
AF045645-1|AAC02605.1|  301|Caenorhabditis elegans Hypothetical ...    28   8.1  
AF016452-9|AAO26003.1|  494|Caenorhabditis elegans Aldehyde dehy...    28   8.1  
AF016452-8|AAM45357.1|  493|Caenorhabditis elegans Aldehyde dehy...    28   8.1  
AF016452-7|AAB66022.2|  493|Caenorhabditis elegans Aldehyde dehy...    28   8.1  

>U23168-10|AAC38810.2|  288|Caenorhabditis elegans Hypothetical
           protein B0228.7 protein.
          Length = 288

 Score =  200 bits (487), Expect = 1e-51
 Identities = 95/209 (45%), Positives = 128/209 (61%)
 Frame = +3

Query: 270 DDPTLFENQIEKEVVTPFGRPSDVLIEGQIKRVQCVLLARHGRKHQLQPSDVNYRANIWA 449
           +DP +  + +   V TP+G+PSD ++EG I  V+CVLLARHGRKH + P +VN+RAN+WA
Sbjct: 13  EDPNILLDPVTVAVDTPYGKPSDDVVEGTINGVECVLLARHGRKHDIMPGNVNFRANLWA 72

Query: 450 LKQVGCTHVLATTATGSLVEEYRPGDLVILDDFIDRTWGRKCTFYDNTEGGPRGVCHLPM 629
           L   G   ++A+TA GSL E   PG L+  D   DRT GR+ TF+D +     GVCH+  
Sbjct: 73  LYSRGVDVIIASTACGSLQENVEPGHLLFPDSVFDRTTGRQSTFFDGSYDQAPGVCHIQA 132

Query: 630 QPAYCGRARAALYSAXKSXGYSCHETGTAVVIQGPRFSSRAESLVHRQWGWPSW*T*QLS 809
            P Y  + R  L S  +      H TG  V I+GPRFS++AES+V + WG  S     + 
Sbjct: 133 HPTYNEKLRQVLISTAERCQLVHHRTGFGVCIEGPRFSTKAESMVFKSWG-ASLVNMTMM 191

Query: 810 LKVVLAKEAGLSYAAVALXTDYDCWXENE 896
            + +LAKE G+ YA  AL TDYDCW E +
Sbjct: 192 PECILAKELGIPYATTALVTDYDCWKEED 220


>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
           protein F10F2.1 protein.
          Length = 2507

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 624 PMQPAYCGRARAALYS--AXKSXGYSCHETGTAVVIQGPRFSSRAES-LVHRQWGWPSW 791
           P+      + +  LYS    K  GYSCH TG  +V+   +   + +S  V  + G   W
Sbjct: 340 PLNSVTFEKEQPVLYSFRTSKGVGYSCHFTGNCLVVNVEKTKGKEQSRCVRAELGARKW 398


>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
           protein F10F2.1 protein.
          Length = 2507

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 624 PMQPAYCGRARAALYS--AXKSXGYSCHETGTAVVIQGPRFSSRAES-LVHRQWGWPSW 791
           P+      + +  LYS    K  GYSCH TG  +V+   +   + +S  V  + G   W
Sbjct: 340 PLNSVTFEKEQPVLYSFRTSKGVGYSCHFTGNCLVVNVEKTKGKEQSRCVRAELGARKW 398


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
            E01G6.1 protein.
          Length = 1391

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 582  YDNTEGGPRGVCHLPMQPAYCGRARAALYSAXKSXGYSCHETGTAVVIQGP 734
            Y + +G P   CH+ + P         +YS  K   Y C    TAV +  P
Sbjct: 949  YISRDGFPP-TCHMQLSPCPTTAPYVCIYSPEKQDSYCCAPIDTAVHVVNP 998


>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
           protein 6, isoform b protein.
          Length = 1227

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 661 HCTARXSLXGTRAMKPALRLSYRDPDSQVAPKAWSIDNGGGHL 789
           HCTAR SL   R+    L+ S+ DP        +S+  GG  L
Sbjct: 250 HCTARNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKL 292


>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
           protein 6, isoform d protein.
          Length = 1196

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 661 HCTARXSLXGTRAMKPALRLSYRDPDSQVAPKAWSIDNGGGHL 789
           HCTAR SL   R+    L+ S+ DP        +S+  GG  L
Sbjct: 219 HCTARNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKL 261


>AF045645-1|AAC02605.1|  301|Caenorhabditis elegans Hypothetical
           protein K02D7.1 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 3/174 (1%)
 Frame = +3

Query: 360 KRVQCVLLARHGRKHQLQPSDVNYRANIWALKQVGCTHVLATTATGSLVEEYRPGDLVIL 539
           K+V C+    H  +H +  +       +  + Q+G   ++ + A G +    R GDL+++
Sbjct: 94  KKVVCLQGRFHPYEHNMDLALCTLPVRV--MHQLGIKIMIVSNAAGGINAVLRHGDLMLI 151

Query: 540 DD--FIDRTWGRKCTFYDNTEGGPR-GVCHLPMQPAYCGRARAALYSAXKSXGYSCHETG 710
            D  F+    G       N    PR G   + +  AY  + R       +    + +E G
Sbjct: 152 KDHIFLPALAGFSPLVGCN---DPRFGARFVSVHDAYDKQLRQLAIDVGRRSDMTLYE-G 207

Query: 711 TAVVIQGPRFSSRAESLVHRQWGWPSW*T*QLSLKVVLAKEAGLSYAAVALXTD 872
             V+  GP++ S AE  + +  G  +        +V +A++ G+     +L T+
Sbjct: 208 VYVMSGGPQYESPAEVSLFKTVGADALGM-STCHEVTVARQCGIKVLGFSLITN 260


>AF016452-9|AAO26003.1|  494|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform c protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 200 VE*FRRYGRCKKNKDRNYRRFGLRRSDAFRESNRKGGGHTVWETLGR 340
           VE  R+Y R  + K   +R+  L +   F E NR+     VW+ L R
Sbjct: 7   VETQRKYFRTGETKPVKFRKQQLLKLKKFIEENREALSEAVWKDLRR 53


>AF016452-8|AAM45357.1|  493|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform b protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 200 VE*FRRYGRCKKNKDRNYRRFGLRRSDAFRESNRKGGGHTVWETLGR 340
           VE  R+Y R  + K   +R+  L +   F E NR+     VW+ L R
Sbjct: 7   VETQRKYFRTGETKPVKFRKQQLLKLKKFIEENREALSEAVWKDLRR 53


>AF016452-7|AAB66022.2|  493|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform a protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 200 VE*FRRYGRCKKNKDRNYRRFGLRRSDAFRESNRKGGGHTVWETLGR 340
           VE  R+Y R  + K   +R+  L +   F E NR+     VW+ L R
Sbjct: 7   VETQRKYFRTGETKPVKFRKQQLLKLKKFIEENREALSEAVWKDLRR 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,951,237
Number of Sequences: 27780
Number of extensions: 456359
Number of successful extensions: 1001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)